RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 CREBZFQ9NS37 354 aa17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 SCAF8Q9UPN6 1271 aaKnown RBP17.17■□□□□ 0.34
TSPAN4-220ENST00000532375 TMEM88BA6NKF7 163 aa17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 PRDX5P30044 214 aa17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 MCAMP43121 646 aa17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 CRKP46108 304 aa17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 DCTPP1Q9H773 170 aa17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 IL1RAPL2Q9NP60 686 aa17.16■□□□□ 0.34
TSPAN4-220ENST00000532375 RAB11FIP3O75154 756 aa17.15■□□□□ 0.34
TSPAN4-220ENST00000532375 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
TSPAN4-220ENST00000532375 MYO5AQ9Y4I1 1855 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-220ENST00000532375 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
TSPAN4-220ENST00000532375 HHIPL2Q6UWX4 724 aa17.14■□□□□ 0.33
TSPAN4-220ENST00000532375 SULF1Q8IWU6 871 aa17.14■□□□□ 0.33
TSPAN4-220ENST00000532375 SPATA5Q8NB90 893 aa17.14■□□□□ 0.33
TSPAN4-220ENST00000532375 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
TSPAN4-220ENST00000532375 CELF2O95319 508 aaKnown RBP17.13■□□□□ 0.33
TSPAN4-220ENST00000532375 UQCRFS1P1P0C7P4 283 aa17.13■□□□□ 0.33
TSPAN4-220ENST00000532375 GORABQ5T7V8 394 aa17.13■□□□□ 0.33
TSPAN4-220ENST00000532375 AACSQ86V21 672 aa17.13■□□□□ 0.33
TSPAN4-220ENST00000532375 CDCA5Q96FF9 252 aa17.13■□□□□ 0.33
TSPAN4-220ENST00000532375 ZDHHC15Q96MV8 337 aa17.13■□□□□ 0.33
TSPAN4-220ENST00000532375 MYH2Q9UKX2 1941 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 APBB1O00213 710 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 DIXDC1Q155Q3 683 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 SPDYE2Q495Y8 402 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 CCDC158Q5M9N0 1113 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 PRAMEF18Q5VWM3 479 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 TBC1D9Q6ZT07 1266 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 EXOC6Q8TAG9 804 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
TSPAN4-220ENST00000532375 CLRN2A0PK11 232 aa17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 RASSF10A6NK89 507 aa17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 LDHBP07195 334 aaKnown RBP17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 RBM5P52756 815 aaKnown RBP eCLIP17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 KLRG1Q96E93 195 aa17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 SNRKQ9NRH2 765 aa17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
TSPAN4-220ENST00000532375 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 CYP2E1P05181 493 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 TTC39AQ5SRH9 613 aa17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 SAPCD2Q86UD0 394 aa17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 CLASRPQ8N2M8 674 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 ZGPATQ8N5A5 531 aaKnown RBP17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 DEFB129Q9H1M3 183 aa17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 TLL2Q9Y6L7 1015 aa17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 GAKO14976 1311 aa17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 MAST3O60307 1309 aa17.1■□□□□ 0.33
TSPAN4-220ENST00000532375 ZAP70P43403 619 aa17.09■□□□□ 0.33
TSPAN4-220ENST00000532375 AAMPQ13685 434 aa17.09■□□□□ 0.33
TSPAN4-220ENST00000532375 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
TSPAN4-220ENST00000532375 ABCF2Q9UG63 623 aa17.09■□□□□ 0.33
TSPAN4-220ENST00000532375 CNTNAP1P78357 1384 aa17.09■□□□□ 0.33
TSPAN4-220ENST00000532375 MECOMQ03112 1051 aa17.08■□□□□ 0.32
TSPAN4-220ENST00000532375 HDAC1Q13547 482 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-220ENST00000532375 SPTY2D1Q68D10 685 aaPredicted RBP17.08■□□□□ 0.32
TSPAN4-220ENST00000532375 NSUN4Q96CB9 384 aaKnown RBP17.08■□□□□ 0.32
TSPAN4-220ENST00000532375 TEPSINQ96N21 525 aa17.08■□□□□ 0.32
TSPAN4-220ENST00000532375 ZNF408Q9H9D4 720 aa17.08■□□□□ 0.32
TSPAN4-220ENST00000532375 MYO1BO43795 1136 aa17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 RASA3Q14644 834 aa17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 CDC42EP5Q6NZY7 148 aa17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 JMYQ8N9B5 988 aa17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 GBA2Q9HCG7 927 aaPredicted RBP17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 PIH1D3Q9NQM4 214 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 MKRN1Q9UHC7 482 aaKnown RBP17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 NDUFB9Q9Y6M9 179 aa17.07■□□□□ 0.32
TSPAN4-220ENST00000532375 SSC5DA1L4H1 1573 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 CACNB3P54284 484 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 DEFB115Q30KQ5 88 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 CDAN1Q8IWY9 1227 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 HHIPL1Q96JK4 782 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 VEZTQ9HBM0 779 aa17.06■□□□□ 0.32
TSPAN4-220ENST00000532375 DOCK2Q92608 1830 aa17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 GPR75-ASB3A0A0A6YYF3 556 aa17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 IFIT2P09913 472 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 VEGFBP49765 207 aa17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 NBPF12Q5TAG4 269 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 MOB2Q70IA6 237 aa17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 ABT1Q9ULW3 272 aaKnown RBP17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 PPP2R3BQ9Y5P8 575 aa17.05■□□□□ 0.32
TSPAN4-220ENST00000532375 MROH7-TTC4A0A0A0MT08 1334 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 PCNTO95613 3336 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 TCP10L2B9ZVM9 353 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 IGHDP01880 384 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 ATP5JP18859 108 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 RHBDL3P58872 404 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 NFIAQ12857 509 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 DZIP1Q86YF9 867 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 C2orf69Q8N8R5 385 aa17.04■□□□□ 0.32
TSPAN4-220ENST00000532375 PAPPA2Q9BXP8 1791 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms