RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 OGFOD1Q8N543 542 aa20.56■□□□□ 0.88
SF3B2-211ENST00000531041 HDAC9Q9UKV0 1011 aa20.56■□□□□ 0.88
SF3B2-211ENST00000531041 TTF2Q9UNY4 1162 aaKnown RBP20.56■□□□□ 0.88
SF3B2-211ENST00000531041 MAST3O60307 1309 aa20.56■□□□□ 0.88
SF3B2-211ENST00000531041 F8W031 263 aaPredicted RBP20.55■□□□□ 0.88
SF3B2-211ENST00000531041 LMOD1P29536 600 aaPredicted RBP20.55■□□□□ 0.88
SF3B2-211ENST00000531041 HDLBPQ00341 1268 aaKnown RBP20.55■□□□□ 0.88
SF3B2-211ENST00000531041 TTC22Q5TAA0 569 aa20.55■□□□□ 0.88
SF3B2-211ENST00000531041 MRIQ9BWK5 157 aa20.55■□□□□ 0.88
SF3B2-211ENST00000531041 MAP4K4O95819 1239 aaPredicted RBP20.54■□□□□ 0.88
SF3B2-211ENST00000531041 MICALL2Q8IY33 904 aa20.54■□□□□ 0.88
SF3B2-211ENST00000531041 KBTBD3Q8NAB2 608 aa20.54■□□□□ 0.88
SF3B2-211ENST00000531041 RAI14Q9P0K7 980 aa20.54■□□□□ 0.88
SF3B2-211ENST00000531041 POLR2AP24928 1970 aaKnown RBP20.54■□□□□ 0.88
SF3B2-211ENST00000531041 IQCA1LA6NCM1 817 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 POTECB2RU33 542 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 H7C1D1 291 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 IDH1O75874 414 aaKnown RBP20.53■□□□□ 0.88
SF3B2-211ENST00000531041 RGS3P49796 1198 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 MECOMQ03112 1051 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 MAP3K12Q12852 859 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 TMED8Q6PL24 325 aaPredicted RBP20.53■□□□□ 0.88
SF3B2-211ENST00000531041 DZIP1Q86YF9 867 aaKnown RBP20.53■□□□□ 0.88
SF3B2-211ENST00000531041 NSUN4Q96CB9 384 aaKnown RBP20.53■□□□□ 0.88
SF3B2-211ENST00000531041 EVI5LQ96CN4 794 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 HACL1Q9UJ83 578 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 SERPINA10Q9UK55 444 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 SHTN1A0MZ66 631 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 EPS15P42566 896 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 ZNF384Q8TF68 577 aa20.53■□□□□ 0.88
SF3B2-211ENST00000531041 CDK5RAP2Q96SN8 1893 aa20.52■□□□□ 0.88
SF3B2-211ENST00000531041 GSPT1P15170 499 aaKnown RBP20.52■□□□□ 0.87
SF3B2-211ENST00000531041 GSTO1P78417 241 aa20.52■□□□□ 0.87
SF3B2-211ENST00000531041 HHIPL2Q6UWX4 724 aa20.52■□□□□ 0.87
SF3B2-211ENST00000531041 SLF2Q8IX21 1173 aa20.52■□□□□ 0.87
SF3B2-211ENST00000531041 CNTROBQ8N137 903 aa20.52■□□□□ 0.87
SF3B2-211ENST00000531041 MTMR14Q8NCE2 650 aa20.52■□□□□ 0.87
SF3B2-211ENST00000531041 FAM163AQ96GL9 167 aaPredicted RBP20.52■□□□□ 0.87
SF3B2-211ENST00000531041 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.52■□□□□ 0.878e-12■■□□□ 14.3
SF3B2-211ENST00000531041 MYOZ2Q9NPC6 264 aa20.52■□□□□ 0.87
SF3B2-211ENST00000531041 ADARB2Q9NS39 739 aaKnown RBP20.52■□□□□ 0.87
SF3B2-211ENST00000531041 TRIM6-TRIM34B2RNG4 842 aa20.51■□□□□ 0.87
SF3B2-211ENST00000531041 VEGFAP15692 232 aaPredicted RBP20.51■□□□□ 0.87
SF3B2-211ENST00000531041 YY1P25490 414 aa20.51■□□□□ 0.87
SF3B2-211ENST00000531041 CRKP46108 304 aa20.51■□□□□ 0.87
SF3B2-211ENST00000531041 NAA16Q6N069 864 aaPredicted RBP20.51■□□□□ 0.87
SF3B2-211ENST00000531041 TICAM2Q86XR7 235 aa20.51■□□□□ 0.87
SF3B2-211ENST00000531041 TEKT1Q969V4 418 aa20.51■□□□□ 0.87
SF3B2-211ENST00000531041 LDHCP07864 332 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 EPHX2P34913 555 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 DIXDC1Q155Q3 683 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 SLC9C2Q5TAH2 1124 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 SAMD7Q7Z3H4 446 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 ZNF526Q8TF50 670 aaPredicted RBP20.5■□□□□ 0.87
SF3B2-211ENST00000531041 ZDHHC15Q96MV8 337 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 RRAGCQ9HB90 399 aa20.5■□□□□ 0.87
SF3B2-211ENST00000531041 GAKO14976 1311 aa20.49■□□□□ 0.87
SF3B2-211ENST00000531041 FOCADQ5VW36 1801 aa20.49■□□□□ 0.87
SF3B2-211ENST00000531041 LRRFIP1Q32MZ4 808 aaKnown RBP20.49■□□□□ 0.87
SF3B2-211ENST00000531041 CFAP100Q494V2 611 aa20.49■□□□□ 0.87
SF3B2-211ENST00000531041 MAGEB6Q8N7X4 407 aa20.49■□□□□ 0.87
SF3B2-211ENST00000531041 RILPL2Q969X0 211 aa20.49■□□□□ 0.87
SF3B2-211ENST00000531041 FSD1Q9BTV5 496 aa20.49■□□□□ 0.87
SF3B2-211ENST00000531041 TAF1DQ9H5J8 278 aaPredicted RBP20.49■□□□□ 0.87
SF3B2-211ENST00000531041 MROH7-TTC4A0A0A0MT08 1334 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 EGFRP00533 1210 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 ZFYP08048 801 aaPredicted RBP20.48■□□□□ 0.87
SF3B2-211ENST00000531041 PDE6AP16499 860 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 SDSP20132 328 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 ADD2P35612 726 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 DLGAP5Q15398 846 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 TBC1D10BQ4KMP7 808 aaPredicted RBP20.48■□□□□ 0.87
SF3B2-211ENST00000531041 BMP2KLQ5H9B9 411 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 USP50Q70EL3 339 aaPredicted RBP20.48■□□□□ 0.87
SF3B2-211ENST00000531041 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
SF3B2-211ENST00000531041 NMRK2Q9NPI5 230 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 DAGLAQ9Y4D2 1042 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 RFX7Q2KHR2 1363 aa20.48■□□□□ 0.87
SF3B2-211ENST00000531041 TCRBV5S4A2TA0A5A2 114 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 SPDYE2BA6NHP3 402 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 SPDYE6P0CI01 402 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 RBM5P52756 815 aaKnown RBP eCLIP20.47■□□□□ 0.87
SF3B2-211ENST00000531041 UBE3CQ15386 1083 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 TRPM4Q8TD43 1214 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 ZNF532Q9HCE3 1301 aa20.47■□□□□ 0.87
SF3B2-211ENST00000531041 WNT10BO00744 389 aa20.46■□□□□ 0.87
SF3B2-211ENST00000531041 CYP7A1P22680 504 aa20.46■□□□□ 0.87
SF3B2-211ENST00000531041 RBM26Q5T8P6 1007 aaKnown RBP20.46■□□□□ 0.87
SF3B2-211ENST00000531041 PNMA8AQ86V59 439 aaPredicted RBP20.46■□□□□ 0.87
SF3B2-211ENST00000531041 PRMT6Q96LA8 375 aaPredicted RBP20.46■□□□□ 0.87
SF3B2-211ENST00000531041 GPBP1L1Q9HC44 474 aaPredicted RBP20.46■□□□□ 0.87
SF3B2-211ENST00000531041 PCDHAC2Q9Y5I4 1007 aa20.46■□□□□ 0.87
SF3B2-211ENST00000531041 GPR75-ASB3A0A0A6YYF3 556 aa20.45■□□□□ 0.86
SF3B2-211ENST00000531041 RNF113AO15541 343 aaKnown RBP20.45■□□□□ 0.86
SF3B2-211ENST00000531041 HIRAP54198 1017 aaPredicted RBP20.45■□□□□ 0.86
SF3B2-211ENST00000531041 APOBEC3HQ6NTF7 200 aaKnown RBP20.45■□□□□ 0.86
SF3B2-211ENST00000531041 ADGRA1Q86SQ6 560 aa20.45■□□□□ 0.86
SF3B2-211ENST00000531041 NBPF9Q3BBW0 867 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms