RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, human

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-208	ENST00000530085	ENC1	O14682	589 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	RBL2	Q08999	1139 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	TBC1D8B	Q0IIM8	1120 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	FAAP100	Q0VG06	881 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	MAP3K11	Q16584	847 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	CEP135	Q66GS9	1140 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	KIAA0825	Q8IV33	1275 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	PHC3	Q8NDX5	983 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	ZNF296	Q8WUU4	475 aa	Predicted RBP	6.1	□□□□□ -1.43
RDX-208	ENST00000530085	TNFRSF25	Q93038	417 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	MUC3B	Q9H195	1237 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	ZNF576	Q9H609	170 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	KLF15	Q9UIH9	416 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	GDF2	Q9UK05	429 aa	Predicted RBP	6.1	□□□□□ -1.43
RDX-208	ENST00000530085	TLR6	Q9Y2C9	796 aa		6.1	□□□□□ -1.43
RDX-208	ENST00000530085	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
RDX-208	ENST00000530085	CELA3A	P09093	270 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	CPB1	P15086	417 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	EIF2AK2	P19525	551 aa	Known RBP	6.09	□□□□□ -1.43
RDX-208	ENST00000530085	LIG3	P49916	1009 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	PRSS36	Q5K4E3	855 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	FBXL19	Q6PCT2	694 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	SLCO4C1	Q6ZQN7	724 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	FAM35A	Q86V20	835 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	MCF2L2	Q86YR7	1114 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	GOLGA6L1	Q8N7Z2	621 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	BSND	Q8WZ55	320 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	PLD4	Q96BZ4	506 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	RHOV	Q96L33	236 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	SPATA32	Q96LK8	384 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	DNAJC2	Q99543	621 aa	Known RBP	6.09	□□□□□ -1.43
RDX-208	ENST00000530085	KCNQ5	Q9NR82	932 aa		6.09	□□□□□ -1.43
RDX-208	ENST00000530085	ADARB2-AS1	A8MUL3	147 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	HYAL3	O43820	417 aa	Predicted RBP	6.08	□□□□□ -1.44
RDX-208	ENST00000530085	GREM1	O60565	184 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	PAGE1	O75459	146 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	PF4	P02776	101 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	FGR	P09769	529 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	ARAF	P10398	606 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	GART	P22102	1010 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	CAMK2G	Q13555	558 aa	Predicted RBP	6.08	□□□□□ -1.44
RDX-208	ENST00000530085	PERM1	Q5SV97	790 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	TTBK2	Q6IQ55	1244 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	AGMO	Q6ZNB7	445 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	DPH6	Q7L8W6	267 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	MICALL1	Q8N3F8	863 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	EAF1	Q96JC9	268 aa	Predicted RBP	6.08	□□□□□ -1.44
RDX-208	ENST00000530085	SEC16B	Q96JE7	1060 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
RDX-208	ENST00000530085	NT5C1A	Q9BXI3	368 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	CLEC4M	Q9H2X3	399 aa	Predicted RBP	6.08	□□□□□ -1.44
RDX-208	ENST00000530085	TMEM39A	Q9NV64	488 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	GGA1	Q9UJY5	639 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	SLC6A14	Q9UN76	642 aa		6.08	□□□□□ -1.44
RDX-208	ENST00000530085	EPX	P11678	715 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	AMPD1	P23109	780 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	ZNF157	P51786	506 aa	Predicted RBP	6.07	□□□□□ -1.44
RDX-208	ENST00000530085	RPS26	P62854	115 aa	Known RBP	6.07	□□□□□ -1.44
RDX-208	ENST00000530085	LMNB2	Q03252	620 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	ELMSAN1	Q6PJG2	1045 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	ADAMTSL4	Q6UY14	1074 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	VN1R5	Q7Z5H4	357 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	TRIM11	Q96F44	468 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	MDFI	Q99750	246 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	ADAM19	Q9H013	955 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	SMG9	Q9H0W8	520 aa	Known RBP	6.07	□□□□□ -1.44
RDX-208	ENST00000530085	SOX13	Q9UN79	622 aa		6.07	□□□□□ -1.44
RDX-208	ENST00000530085	PTPRA	P18433	802 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	TFE3	P19532	575 aa	Predicted RBP	6.06	□□□□□ -1.44
RDX-208	ENST00000530085	ADH6	P28332	368 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	ADH7	P40394	386 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	FAM160A1	Q05DH4	1040 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	PPP2R3A	Q06190	1150 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	PCDH1	Q08174	1060 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	LRP8	Q14114	963 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	ZNF423	Q2M1K9	1284 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	GOLM1	Q8NBJ4	401 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	TTC9	Q92623	222 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.06	□□□□□ -1.44
RDX-208	ENST00000530085	LNPK	Q9C0E8	428 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	NOP53	Q9NZM5	478 aa	Known RBP	6.06	□□□□□ -1.44
RDX-208	ENST00000530085	FRRS1L	Q9P0K9	344 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	GPN3	Q9UHW5	284 aa	Predicted RBP	6.06	□□□□□ -1.44
RDX-208	ENST00000530085	NAGPA	Q9UK23	515 aa		6.06	□□□□□ -1.44
RDX-208	ENST00000530085	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.06	□□□□□ -1.44
RDX-208	ENST00000530085	B3GALT4	O96024	378 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	BMP6	P22004	513 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	SOGA3	Q5TF21	947 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	PCNX4	Q63HM2	1172 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	FCHSD1	Q86WN1	690 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	TRIM42	Q8IWZ5	723 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	LPIN3	Q9BQK8	851 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	UBP1	Q9NZI7	540 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	TRIM33	Q9UPN9	1127 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	EFR3B	Q9Y2G0	817 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	SAMM50	Q9Y512	469 aa		6.05	□□□□□ -1.44
RDX-208	ENST00000530085	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.04	□□□□□ -1.44
RDX-208	ENST00000530085	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.04	□□□□□ -1.44
RDX-208	ENST00000530085	NEURL1B	A8MQ27	555 aa		6.04	□□□□□ -1.44
RDX-208	ENST00000530085	STK10	O94804	968 aa	Known RBP	6.04	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms