RNA–Protein interactions for RNA: ENST00000528487.1

SYVN1-210, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 775 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-210ENST00000528487 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
SYVN1-210ENST00000528487 MAST3O60307 1309 aa17.1■□□□□ 0.33
SYVN1-210ENST00000528487 ITGBL1O95965 494 aaPredicted RBP17.09■□□□□ 0.33
SYVN1-210ENST00000528487 CRKP46108 304 aa17.09■□□□□ 0.33
SYVN1-210ENST00000528487 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
SYVN1-210ENST00000528487 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
SYVN1-210ENST00000528487 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
SYVN1-210ENST00000528487 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
SYVN1-210ENST00000528487 ASTN2O75129 1339 aaPredicted RBP17.09■□□□□ 0.33
SYVN1-210ENST00000528487 MYH13Q9UKX3 1938 aa17.09■□□□□ 0.33
SYVN1-210ENST00000528487 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 CYP2E1P05181 493 aaPredicted RBP17.08■□□□□ 0.32
SYVN1-210ENST00000528487 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 ZAP70P43403 619 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 ANGEL2Q5VTE6 544 aaKnown RBP17.08■□□□□ 0.32
SYVN1-210ENST00000528487 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 SMC5Q8IY18 1101 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 PRMT6Q96LA8 375 aaPredicted RBP17.08■□□□□ 0.32
SYVN1-210ENST00000528487 GGA3Q9NZ52 723 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 PCDHAC2Q9Y5I4 1007 aa17.08■□□□□ 0.32
SYVN1-210ENST00000528487 ATP5JP18859 108 aa17.07■□□□□ 0.32
SYVN1-210ENST00000528487 HHIPL2Q6UWX4 724 aa17.07■□□□□ 0.32
SYVN1-210ENST00000528487 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
SYVN1-210ENST00000528487 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
SYVN1-210ENST00000528487 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.07■□□□□ 0.32
SYVN1-210ENST00000528487 PITPNM2Q9BZ72 1349 aa17.06■□□□□ 0.32
SYVN1-210ENST00000528487 MYO1BO43795 1136 aa17.06■□□□□ 0.32
SYVN1-210ENST00000528487 KRT26Q7Z3Y9 468 aa17.06■□□□□ 0.32
SYVN1-210ENST00000528487 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
SYVN1-210ENST00000528487 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
SYVN1-210ENST00000528487 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
SYVN1-210ENST00000528487 GLIS2Q9BZE0 524 aaPredicted RBP17.06■□□□□ 0.32
SYVN1-210ENST00000528487 LRP2BPQ9P2M1 347 aa17.06■□□□□ 0.32
SYVN1-210ENST00000528487 PASKQ96RG2 1323 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 MECOMQ03112 1051 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 DIXDC1Q155Q3 683 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 SULF1Q8IWU6 871 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 SLF2Q8IX21 1173 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 GPATCH3Q96I76 525 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 ECHDC1Q9NTX5 307 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 RAI14Q9P0K7 980 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 NDUFB9Q9Y6M9 179 aa17.05■□□□□ 0.32
SYVN1-210ENST00000528487 AKAP11Q9UKA4 1901 aa17.04■□□□□ 0.32
SYVN1-210ENST00000528487 TRAF5O00463 557 aa17.04■□□□□ 0.32
SYVN1-210ENST00000528487 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
SYVN1-210ENST00000528487 APOBEC3HQ6NTF7 200 aaKnown RBP17.04■□□□□ 0.32
SYVN1-210ENST00000528487 NSUN4Q96CB9 384 aaKnown RBP17.04■□□□□ 0.32
SYVN1-210ENST00000528487 BOLA2Q9H3K6 86 aa17.04■□□□□ 0.32
SYVN1-210ENST00000528487 TDRD3Q9H7E2 651 aaKnown RBP17.04■□□□□ 0.32
SYVN1-210ENST00000528487 PIH1D3Q9NQM4 214 aaKnown RBP17.04■□□□□ 0.32
SYVN1-210ENST00000528487 AOX1Q06278 1338 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 CLRN2A0PK11 232 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 ADM5C9JUS6 153 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 IGSF3O75054 1194 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 NEFLP07196 543 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 HSPA6P17066 643 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 GSTO1P78417 241 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 NUCB1Q02818 461 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 APOBEC3FQ8IUX4 373 aaKnown RBP17.03■□□□□ 0.32
SYVN1-210ENST00000528487 OTUD7AQ8TE49 926 aaPredicted RBP17.03■□□□□ 0.32
SYVN1-210ENST00000528487 ZNF384Q8TF68 577 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 FAM163AQ96GL9 167 aaPredicted RBP17.03■□□□□ 0.32
SYVN1-210ENST00000528487 DNAJC2Q99543 621 aaKnown RBP17.03■□□□□ 0.32
SYVN1-210ENST00000528487 HAUS7Q99871 368 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 ANTXR1Q9H6X2 564 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
SYVN1-210ENST00000528487 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
SYVN1-210ENST00000528487 LDHCP07864 332 aa17.02■□□□□ 0.32
SYVN1-210ENST00000528487 APLP1P51693 650 aa17.02■□□□□ 0.32
SYVN1-210ENST00000528487 FMR1Q06787 632 aaKnown RBP eCLIP17.02■□□□□ 0.32
SYVN1-210ENST00000528487 TTF1Q15361 905 aaPredicted RBP17.02■□□□□ 0.32
SYVN1-210ENST00000528487 SPDYE2Q495Y8 402 aa17.02■□□□□ 0.32
SYVN1-210ENST00000528487 DLK2Q6UY11 383 aa17.02■□□□□ 0.32
SYVN1-210ENST00000528487 CHD1LQ86WJ1 897 aa17.02■□□□□ 0.32
SYVN1-210ENST00000528487 VEZTQ9HBM0 779 aa17.02■□□□□ 0.32
SYVN1-210ENST00000528487 SCAF8Q9UPN6 1271 aaKnown RBP17.02■□□□□ 0.32
SYVN1-210ENST00000528487 GAKO14976 1311 aa17.01■□□□□ 0.31
SYVN1-210ENST00000528487 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
SYVN1-210ENST00000528487 GOLIM4O00461 696 aa17.01■□□□□ 0.31
SYVN1-210ENST00000528487 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
SYVN1-210ENST00000528487 TSHZ3Q63HK5 1081 aa17.01■□□□□ 0.31
SYVN1-210ENST00000528487 LNPKQ9C0E8 428 aa17.01■□□□□ 0.31
SYVN1-210ENST00000528487 PAG1Q9NWQ8 432 aa17.01■□□□□ 0.31
SYVN1-210ENST00000528487 MROH7-TTC4A0A0A0MT08 1334 aa17■□□□□ 0.31
SYVN1-210ENST00000528487 ERC2O15083 957 aa17■□□□□ 0.31
SYVN1-210ENST00000528487 MX1P20591 662 aa17■□□□□ 0.31
SYVN1-210ENST00000528487 MAP3K12Q12852 859 aa17■□□□□ 0.31
SYVN1-210ENST00000528487 NAA16Q6N069 864 aaPredicted RBP17■□□□□ 0.31
SYVN1-210ENST00000528487 DEFB129Q9H1M3 183 aa17■□□□□ 0.31
SYVN1-210ENST00000528487 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
SYVN1-210ENST00000528487 SALL3Q9BXA9 1300 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 GPR75-ASB3A0A0A6YYF3 556 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 CST9Q5W186 159 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 CDC42EP5Q6NZY7 148 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 EDC3Q96F86 508 aaKnown RBP16.99■□□□□ 0.31
SYVN1-210ENST00000528487 CDCA5Q96FF9 252 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
SYVN1-210ENST00000528487 TMEM88BA6NKF7 163 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms