RNA–Protein interactions for RNA: ENST00000528235.5

CHKA-204, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-204ENST00000528235 POLR3GLQ9BT43 218 aa7.36□□□□□ -1.23
CHKA-204ENST00000528235 MRC1P22897 1456 aa7.36□□□□□ -1.23
CHKA-204ENST00000528235 FAM181BA6NEQ2 426 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 PER1O15534 1290 aaPredicted RBP7.35□□□□□ -1.23
CHKA-204ENST00000528235 LILRB3O75022 631 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 QPCTQ16769 361 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 TPTE2Q6XPS3 522 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 DZIP3Q86Y13 1208 aaKnown RBP7.35□□□□□ -1.23
CHKA-204ENST00000528235 LARGE2Q8N3Y3 721 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 ADARB2Q9NS39 739 aaKnown RBP7.35□□□□□ -1.23
CHKA-204ENST00000528235 LIMD1Q9UGP4 676 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 ZNF652Q9Y2D9 606 aa7.35□□□□□ -1.23
CHKA-204ENST00000528235 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
CHKA-204ENST00000528235 CAMTA2O94983 1202 aa7.34□□□□□ -1.23
CHKA-204ENST00000528235 SCNN1DP51172 638 aa7.34□□□□□ -1.23
CHKA-204ENST00000528235 CC2D2BQ6DHV5 1058 aa7.34□□□□□ -1.23
CHKA-204ENST00000528235 PURBQ96QR8 312 aaKnown RBP7.34□□□□□ -1.23
CHKA-204ENST00000528235 PSMD1Q99460 953 aa7.34□□□□□ -1.23
CHKA-204ENST00000528235 GLIS2Q9BZE0 524 aaPredicted RBP7.34□□□□□ -1.23
CHKA-204ENST00000528235 SLC24A3Q9HC58 644 aa7.34□□□□□ -1.23
CHKA-204ENST00000528235 HEG1Q9ULI3 1381 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 TRPA1O75762 1119 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 UPP2O95045 317 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 ZIC2O95409 532 aaPredicted RBP7.33□□□□□ -1.24
CHKA-204ENST00000528235 A1BGP04217 495 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 CLK2P49760 499 aaKnown RBP7.33□□□□□ -1.24
CHKA-204ENST00000528235 HUNKP57058 714 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 TEFQ10587 303 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 LCE2CQ5TA81 110 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 CLEC4GQ6UXB4 293 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 CDC37L1Q7L3B6 337 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 CTU1Q7Z7A3 348 aaKnown RBP7.33□□□□□ -1.24
CHKA-204ENST00000528235 NIM1KQ8IY84 436 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 ANP32EQ9BTT0 268 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 KLF16Q9BXK1 252 aaPredicted RBP7.33□□□□□ -1.24
CHKA-204ENST00000528235 TMX4Q9H1E5 349 aaPredicted RBP7.33□□□□□ -1.24
CHKA-204ENST00000528235 SAGE1Q9NXZ1 904 aa7.33□□□□□ -1.24
CHKA-204ENST00000528235 COL4A5P29400 1685 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 KLRG2A4D1S0 409 aaPredicted RBP7.32□□□□□ -1.24
CHKA-204ENST00000528235 H3BM21 787 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 PDIA4P13667 645 aaKnown RBP7.32□□□□□ -1.24
CHKA-204ENST00000528235 HABP4Q5JVS0 413 aaKnown RBP7.32□□□□□ -1.24
CHKA-204ENST00000528235 RGMBQ6NW40 437 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 ZNF790Q6PG37 636 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 MORC1Q86VD1 984 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 ZNF496Q96IT1 587 aaPredicted RBP7.32□□□□□ -1.24
CHKA-204ENST00000528235 FMNL2Q96PY5 1086 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 ZIC5Q96T25 663 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 BCL2L13Q9BXK5 485 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 GPRC5DQ9NZD1 345 aa7.32□□□□□ -1.24
CHKA-204ENST00000528235 NIP7Q9Y221 180 aaKnown RBP eCLIP7.32□□□□□ -1.24
CHKA-204ENST00000528235 TCERG1O14776 1098 aaKnown RBP7.31□□□□□ -1.24
CHKA-204ENST00000528235 PPIP5K2O43314 1243 aa7.31□□□□□ -1.24
CHKA-204ENST00000528235 HMOX1P09601 288 aa7.31□□□□□ -1.24
CHKA-204ENST00000528235 GRM5P41594 1212 aa7.31□□□□□ -1.24
CHKA-204ENST00000528235 KIF23Q02241 960 aaPredicted RBP7.31□□□□□ -1.24
CHKA-204ENST00000528235 MTHFSDQ2M296 383 aaKnown RBP7.31□□□□□ -1.24
CHKA-204ENST00000528235 C4orf48Q5BLP8 95 aa7.31□□□□□ -1.24
CHKA-204ENST00000528235 RPGRQ92834 1020 aaKnown RBP7.31□□□□□ -1.24
CHKA-204ENST00000528235 GPKOWQ92917 476 aaPredicted RBP eCLIP7.31□□□□□ -1.24
CHKA-204ENST00000528235 RNF186Q9NXI6 227 aa7.31□□□□□ -1.24
CHKA-204ENST00000528235 HDAC9Q9UKV0 1011 aa7.31□□□□□ -1.24
CHKA-204ENST00000528235 TAF1P21675 1872 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 IL13P35225 146 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 GMPRP36959 345 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 ZNF157P51786 506 aaPredicted RBP7.3□□□□□ -1.24
CHKA-204ENST00000528235 PKN2Q16513 984 aaKnown RBP7.3□□□□□ -1.24
CHKA-204ENST00000528235 RTL5Q5HYW3 569 aaPredicted RBP7.3□□□□□ -1.24
CHKA-204ENST00000528235 SH3RF1Q7Z6J0 888 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 USP48Q86UV5 1035 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 C2orf69Q8N8R5 385 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 ITPKCQ96DU7 683 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 PGAP2Q9UHJ9 254 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 MAP4K5Q9Y4K4 846 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 LAMB2P55268 1798 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 RBBP6Q7Z6E9 1792 aaKnown RBP7.3□□□□□ -1.24
CHKA-204ENST00000528235 PAPPA2Q9BXP8 1791 aa7.3□□□□□ -1.24
CHKA-204ENST00000528235 LAMB4A4D0S4 1761 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 MAGEB6P1A0A0J9YX57 407 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 H7C1D1 291 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 MAN1A2O60476 641 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 NR3C2P08235 984 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
CHKA-204ENST00000528235 GMPSP49915 693 aaPredicted RBP7.29□□□□□ -1.24
CHKA-204ENST00000528235 CXCL9Q07325 125 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 AOC3Q16853 763 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 VASH1Q7L8A9 365 aaPredicted RBP7.29□□□□□ -1.24
CHKA-204ENST00000528235 TRMT44Q8IYL2 757 aaKnown RBP7.29□□□□□ -1.24
CHKA-204ENST00000528235 RBM17Q96I25 401 aaKnown RBP7.29□□□□□ -1.24
CHKA-204ENST00000528235 PKNOX2Q96KN3 472 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 C1QTNF2Q9BXJ5 285 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 NYXQ9GZU5 481 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 ZFAND3Q9H8U3 227 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 GBA2Q9HCG7 927 aaPredicted RBP7.29□□□□□ -1.24
CHKA-204ENST00000528235 POLR3EQ9NVU0 708 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 ZNRF3Q9ULT6 936 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 NPC1L1Q9UHC9 1359 aa7.29□□□□□ -1.24
CHKA-204ENST00000528235 CDHR2Q9BYE9 1310 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 ANKRD36CQ5JPF3 1778 aa7.28□□□□□ -1.24
CHKA-204ENST00000528235 SNED1Q8TER0 1413 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms