RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 C17orf99Q6UX52 265 aa20.83■□□□□ 0.93
CHMP4A-203ENST00000527154 BTBD19C9JJ37 291 aa20.82■□□□□ 0.92
CHMP4A-203ENST00000527154 CTGFP29279 349 aa20.82■□□□□ 0.92
CHMP4A-203ENST00000527154 GJA8P48165 433 aa20.82■□□□□ 0.92
CHMP4A-203ENST00000527154 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
CHMP4A-203ENST00000527154 NKX2-3Q8TAU0 364 aa20.82■□□□□ 0.92
CHMP4A-203ENST00000527154 SNCAIPQ9Y6H5 919 aa20.82■□□□□ 0.92
CHMP4A-203ENST00000527154 ADGRA2Q96PE1 1338 aa20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 GJB1P08034 283 aa20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 CETPP11597 493 aa20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 G2E3Q7L622 706 aa20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 SLC17A8Q8NDX2 589 aa20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 TDRD7Q8NHU6 1098 aaKnown RBP20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 TMEM39BQ9GZU3 492 aa20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 TDRD3Q9H7E2 651 aaKnown RBP20.81■□□□□ 0.92
CHMP4A-203ENST00000527154 ANKRD18BA2A2Z9 1011 aa20.8■□□□□ 0.92
CHMP4A-203ENST00000527154 DZIP1LQ8IYY4 767 aaKnown RBP20.8■□□□□ 0.92
CHMP4A-203ENST00000527154 HELBQ8NG08 1087 aaPredicted RBP20.8■□□□□ 0.92
CHMP4A-203ENST00000527154 SRRDQ9UH36 339 aa20.8■□□□□ 0.92
CHMP4A-203ENST00000527154 MYCP01106 439 aaPredicted RBP20.79■□□□□ 0.92
CHMP4A-203ENST00000527154 FOXO4P98177 505 aa20.79■□□□□ 0.92
CHMP4A-203ENST00000527154 KIF22Q14807 665 aa20.79■□□□□ 0.92
CHMP4A-203ENST00000527154 ERO1BQ86YB8 467 aa20.79■□□□□ 0.92
CHMP4A-203ENST00000527154 CSADQ9Y600 493 aa20.79■□□□□ 0.92
CHMP4A-203ENST00000527154 IRF6O14896 467 aa20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 ZBTB7BO15156 539 aaPredicted RBP20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 RBM5P52756 815 aaKnown RBP eCLIP20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 MFSD14BQ5SR56 506 aa20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 LINS1Q8NG48 757 aa20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 DPF3Q92784 378 aa20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 HTATIP2Q9BUP3 242 aa20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 JAG2Q9Y219 1238 aa20.78■□□□□ 0.92
CHMP4A-203ENST00000527154 APAF1O14727 1248 aa20.77■□□□□ 0.92
CHMP4A-203ENST00000527154 WDHD1O75717 1129 aaPredicted RBP20.77■□□□□ 0.92
CHMP4A-203ENST00000527154 PPIL2Q13356 520 aa20.77■□□□□ 0.92
CHMP4A-203ENST00000527154 SNAPC2Q13487 334 aa20.77■□□□□ 0.92
CHMP4A-203ENST00000527154 TRIM47Q96LD4 638 aa20.77■□□□□ 0.92
CHMP4A-203ENST00000527154 TTF2Q9UNY4 1162 aaKnown RBP20.77■□□□□ 0.92
CHMP4A-203ENST00000527154 TNNI2P48788 182 aa20.76■□□□□ 0.91
CHMP4A-203ENST00000527154 HDLBPQ00341 1268 aaKnown RBP20.76■□□□□ 0.91
CHMP4A-203ENST00000527154 IFIT5Q13325 482 aaKnown RBP20.76■□□□□ 0.91
CHMP4A-203ENST00000527154 STK31Q9BXU1 1019 aa20.76■□□□□ 0.91
CHMP4A-203ENST00000527154 MYH16Q9H6N6 1097 aa20.76■□□□□ 0.91
CHMP4A-203ENST00000527154 RPAP1Q9BWH6 1393 aaPredicted RBP20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 TCP10L2B9ZVM9 353 aa20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 SOX1O00570 391 aaPredicted RBP20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 OSBPP22059 807 aa20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 GRK4P32298 578 aa20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 CRKP46108 304 aa20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 RIPOR2Q9Y4F9 1068 aa20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 NR2E3Q9Y5X4 410 aa20.75■□□□□ 0.91
CHMP4A-203ENST00000527154 MNX1P50219 401 aaPredicted RBP20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 FLIIQ13045 1269 aa20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 FKBP1CQ5VVH2 108 aa20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 ANKRD23Q86SG2 305 aa20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 FAM83AQ86UY5 434 aa20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 DNAAF4Q8WXU2 420 aa20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 MRIQ9BWK5 157 aa20.74■□□□□ 0.91
CHMP4A-203ENST00000527154 SLC4A2P04920 1241 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 CCL5P13501 91 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 CAPN2P17655 700 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 PSMC4P43686 418 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 PPATQ06203 517 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 MOGSQ13724 837 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 UBE4AQ14139 1066 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 FAM84BQ96KN1 310 aaPredicted RBP20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 KCNH4Q9UQ05 1017 aa20.73■□□□□ 0.91
CHMP4A-203ENST00000527154 HOXD10P28358 340 aa20.72■□□□□ 0.91
CHMP4A-203ENST00000527154 GRIK5Q16478 980 aa20.72■□□□□ 0.91
CHMP4A-203ENST00000527154 GPR153Q6NV75 609 aa20.72■□□□□ 0.91
CHMP4A-203ENST00000527154 ZKSCAN4Q969J2 545 aaPredicted RBP20.72■□□□□ 0.91
CHMP4A-203ENST00000527154 WRNIP1Q96S55 665 aa20.72■□□□□ 0.91
CHMP4A-203ENST00000527154 U2AF1L4Q8WU68 220 aaKnown RBP20.71■□□□□ 0.91
CHMP4A-203ENST00000527154 CPA4Q9UI42 421 aa20.71■□□□□ 0.91
CHMP4A-203ENST00000527154 BCRP11274 1271 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 HIBADHP31937 336 aaKnown RBP20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 EPHA10Q5JZY3 1008 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 RAET1EQ8TD07 263 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 ZDHHC15Q96MV8 337 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 RNF208Q9H0X6 261 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 ZNF112Q9UJU3 913 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 MYPNQ86TC9 1320 aa20.7■□□□□ 0.9
CHMP4A-203ENST00000527154 FARP2O94887 1054 aaPredicted RBP20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 SGPL1O95470 568 aa20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 TWISTNBQ3B726 338 aaPredicted RBP20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 LDHAL6AQ6ZMR3 332 aa20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 TSR2Q969E8 191 aaKnown RBP20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 HOOK2Q96ED9 719 aa20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 LRCH3Q96II8 777 aa20.69■□□□□ 0.9
CHMP4A-203ENST00000527154 GYG1P46976 350 aa20.68■□□□□ 0.9
CHMP4A-203ENST00000527154 APOBEC3HQ6NTF7 200 aaKnown RBP20.68■□□□□ 0.9
CHMP4A-203ENST00000527154 LMBR1LQ6UX01 489 aa20.68■□□□□ 0.9
CHMP4A-203ENST00000527154 FBXO33Q7Z6M2 555 aa20.68■□□□□ 0.9
CHMP4A-203ENST00000527154 SLAIN1Q8ND83 568 aa20.68■□□□□ 0.9
CHMP4A-203ENST00000527154 UNC80Q8N2C7 3258 aa20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 PDHXO00330 501 aa20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 BMP8BP34820 402 aa20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 UBXN2AP68543 259 aa20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 PRKCZQ05513 592 aa20.67■□□□□ 0.9
CHMP4A-203ENST00000527154 CCDC27Q2M243 656 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms