RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 MTMR14Q8NCE2 650 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 DBNDD2Q9BQY9 259 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 NOL10Q9BSC4 688 aaKnown RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 GLIS2Q9BZE0 524 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 CCDC8Q9H0W5 538 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 VEZTQ9HBM0 779 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 CREBZFQ9NS37 354 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 LRP2BPQ9P2M1 347 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 PGAP2Q9UHJ9 254 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 PPP2R3BQ9Y5P8 575 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 SCN9AQ15858 1988 aa6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
HMGB1P40-201ENST00000525121 ADAMTSL1Q8N6G6 1762 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 PASKQ96RG2 1323 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 ADM5C9JUS6 153 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 TRAF5O00463 557 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 IGSF3O75054 1194 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 ITGBL1O95965 494 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 NEFLP07196 543 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 CENPBP07199 599 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 LDHCP07864 332 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 PRDX5P30044 214 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 NBPF9Q3BBW0 867 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 PAXIP1Q6ZW49 1069 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 C2orf69Q8N8R5 385 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 EAF2Q96CJ1 260 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 GCC1Q96CN9 775 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 ZNF512BQ96KM6 892 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 ZDHHC15Q96MV8 337 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 RWDD1Q9H446 243 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 RAI14Q9P0K7 980 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 HMG20BQ9P0W2 317 aa6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 DBNLQ9UJU6 430 aaKnown RBP6.59□□□□□ -1.35
HMGB1P40-201ENST00000525121 ASTN2O75129 1339 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 CLRN2A0PK11 232 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 MCAMP43121 646 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 MAP3K12Q12852 859 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 HDAC1Q13547 482 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 TTLL12Q14166 644 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 TTF1Q15361 905 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 SUPT20HL1Q3ZLR7 823 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 SPDYE2Q495Y8 402 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 HHIPL2Q6UWX4 724 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 EXOC6Q8TAG9 804 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 HOOK2Q96ED9 719 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 CDCA5Q96FF9 252 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 PRMT6Q96LA8 375 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 TDRD3Q9H7E2 651 aaKnown RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 SNRKQ9NRH2 765 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 TLR7Q9NYK1 1049 aaKnown RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 PCDHB15Q9Y5E8 787 aa6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P40-201ENST00000525121 MROH7-TTC4A0A0A0MT08 1334 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 TCP10L2B9ZVM9 353 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 ERC2O15083 957 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 IDH1O75874 414 aaKnown RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 BAG3O95817 575 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 PLCG2P16885 1265 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 ECE1P42892 770 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZAP70P43403 619 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 FKBP1BP68106 108 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 MECOMQ03112 1051 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 DIXDC1Q155Q3 683 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 GRIK5Q16478 980 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 NAA16Q6N069 864 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 TMED8Q6PL24 325 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 PI16Q6UXB8 463 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 ARMC9Q7Z3E5 817 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 CERS3Q8IU89 383 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZBED3Q96IU2 234 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 DEFB129Q9H1M3 183 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 GBA2Q9HCG7 927 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZNF70Q9UC06 446 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 DAGLAQ9Y4D2 1042 aa6.57□□□□□ -1.36
HMGB1P40-201ENST00000525121 PPP1R12BO60237 982 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 SMARCA5O60264 1052 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 MAP4K4O95819 1239 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 ATP5JP18859 108 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 BTDP43251 543 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 HUNKP57058 714 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 IRX6P78412 446 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 RASA3Q14644 834 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 DEFB115Q30KQ5 88 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 LRRFIP1Q32MZ4 808 aaKnown RBP6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 ANKRD45Q5TZF3 282 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 FKBP1CQ5VVH2 108 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZSCAN25Q6NSZ9 544 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 TBC1D9Q6ZT07 1266 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 ECHDC1Q9NTX5 307 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 USP40Q9NVE5 1235 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 MKRN1Q9UHC7 482 aaKnown RBP6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 TLL2Q9Y6L7 1015 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 MYH13Q9UKX3 1938 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 CNTNAP1P78357 1384 aa6.56□□□□□ -1.36
HMGB1P40-201ENST00000525121 ZNF646O15015 1829 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms