RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 KARSQ15046 597 aaKnown RBP15.24■□□□□ 0.03
CAPN1-202ENST00000524773 TIGD1Q96MW7 591 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 NLRP2Q9NX02 1062 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 CPLX1O14810 134 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
CAPN1-202ENST00000524773 ADORA1P30542 326 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 NLRP12P59046 1061 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
CAPN1-202ENST00000524773 TRMT44Q8IYL2 757 aaKnown RBP15.24■□□□□ 0.03
CAPN1-202ENST00000524773 PRC1O43663 620 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 EVCP57679 992 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 PDE4BQ07343 736 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-202ENST00000524773 TMCO3Q6UWJ1 677 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 ATG9AQ7Z3C6 839 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 PLCD3Q8N3E9 789 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 CCDC150Q8NCX0 1101 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 HPS5Q9UPZ3 1129 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 MED1Q15648 1581 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-202ENST00000524773 LTN1O94822 1766 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 KDM4FA0A1W2PPD8 638 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 FOXP2O15409 715 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 CDK11BP21127 795 aaKnown RBP15.23■□□□□ 0.03
CAPN1-202ENST00000524773 SCARF1Q14162 830 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 KCNH5Q8NCM2 988 aa15.23■□□□□ 0.03
CAPN1-202ENST00000524773 HEG1Q9ULI3 1381 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 ZMYM1Q5SVZ6 1142 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 ANO1Q5XXA6 986 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 TOGARAM2Q6ZUX3 1019 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 FOXP4Q8IVH2 680 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-202ENST00000524773 REXO1L1PQ8IX06 675 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 FBXO18Q8NFZ0 1043 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 SMARCE1Q969G3 411 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 CCDC66A2RUB6 948 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 HMGB1P09429 215 aaKnown RBP15.22■□□□□ 0.03
CAPN1-202ENST00000524773 GNG11P61952 73 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 MTF1Q14872 753 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 KRT28Q7Z3Y7 464 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 CCDC82Q8N4S0 544 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 ZBTB3Q9H5J0 574 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 IMPACTQ9P2X3 320 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 C1orf167Q5SNV9 1468 aa15.22■□□□□ 0.03
CAPN1-202ENST00000524773 FGAP02671 866 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 SYKP43405 635 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 TTLL7Q6ZT98 887 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 DDX17Q92841 729 aaKnown RBP15.21■□□□□ 0.03
CAPN1-202ENST00000524773 INTS13Q9NVM9 706 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 PARP3Q9Y6F1 533 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 A0A1B0GUL7 405 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 COBLO75128 1261 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 CYP2C19P33261 490 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 ANTXR2P58335 489 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 SHC4Q6S5L8 630 aa15.21■□□□□ 0.03
CAPN1-202ENST00000524773 PUS7LQ9H0K6 701 aaKnown RBP15.21■□□□□ 0.03
CAPN1-202ENST00000524773 PSDA5PKW4 1024 aaPredicted RBP15.21■□□□□ 0.02
CAPN1-202ENST00000524773 VWA3AA6NCI4 1184 aa15.21■□□□□ 0.02
CAPN1-202ENST00000524773 LONRF3Q496Y0 759 aa15.21■□□□□ 0.02
CAPN1-202ENST00000524773 SH3TC1Q8TE82 1336 aa15.21■□□□□ 0.02
CAPN1-202ENST00000524773 RNF113AO15541 343 aaKnown RBP15.2■□□□□ 0.02
CAPN1-202ENST00000524773 TADA3O75528 432 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 KIF23Q02241 960 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-202ENST00000524773 GRIN1Q05586 938 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 KCNG4Q8TDN1 519 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 ZNF274Q96GC6 653 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-202ENST00000524773 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-202ENST00000524773 LAMA4Q16363 1823 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 A0A1W2PQ27 194 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 A0A1W2PQ64 194 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 A0A1W2PQD8 194 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 ZRANB2O95218 330 aaKnown RBP eCLIP15.2■□□□□ 0.024e-7■■■■■ 32.1
CAPN1-202ENST00000524773 TOP1P11387 765 aaKnown RBP15.2■□□□□ 0.02
CAPN1-202ENST00000524773 BMP6P22004 513 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 OAS2P29728 719 aaKnown RBP15.2■□□□□ 0.02
CAPN1-202ENST00000524773 ARHGEF25Q86VW2 580 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 DSCC1Q9BVC3 393 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 SLC52A2Q9HAB3 445 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 NCAPD2Q15021 1401 aa15.2■□□□□ 0.02
CAPN1-202ENST00000524773 FOXO4P98177 505 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 LRP10Q7Z4F1 713 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 MICU3Q86XE3 530 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 CPLX3Q8WVH0 158 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 STRCP1A6NGW2 1772 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 KIF2AO00139 706 aaPredicted RBP15.19■□□□□ 0.02
CAPN1-202ENST00000524773 TPM4P67936 248 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 WWC2Q6AWC2 1192 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 CMTR1Q8N1G2 835 aaKnown RBP15.19■□□□□ 0.02
CAPN1-202ENST00000524773 PPP2R2CQ9Y2T4 447 aa15.19■□□□□ 0.02
CAPN1-202ENST00000524773 TAF3Q5VWG9 929 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 HELLSQ9NRZ9 838 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 PCDHA5Q9Y5H7 936 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 TBC1D8O95759 1140 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 CADPS2Q86UW7 1296 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 METTL16Q86W50 562 aaKnown RBP15.18■□□□□ 0.02
CAPN1-202ENST00000524773 VPS37DQ86XT2 251 aa15.18■□□□□ 0.02
CAPN1-202ENST00000524773 CABLES1Q8TDN4 633 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms