RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 SPTY2D1Q68D10 685 aaPredicted RBP18.52■□□□□ 0.56
SF3B2-202ENST00000524475 HHIPL2Q6UWX4 724 aa18.52■□□□□ 0.56
SF3B2-202ENST00000524475 CCDC8Q9H0W5 538 aaPredicted RBP18.52■□□□□ 0.56
SF3B2-202ENST00000524475 IL1RAPL2Q9NP60 686 aa18.52■□□□□ 0.56
SF3B2-202ENST00000524475 TLR7Q9NYK1 1049 aaKnown RBP18.52■□□□□ 0.56
SF3B2-202ENST00000524475 LDHBP07195 334 aaKnown RBP18.51■□□□□ 0.55
SF3B2-202ENST00000524475 CRKP46108 304 aa18.51■□□□□ 0.55
SF3B2-202ENST00000524475 KRT26Q7Z3Y9 468 aa18.51■□□□□ 0.55
SF3B2-202ENST00000524475 APOBEC3FQ8IUX4 373 aaKnown RBP18.51■□□□□ 0.55
SF3B2-202ENST00000524475 SULF1Q8IWU6 871 aa18.51■□□□□ 0.55
SF3B2-202ENST00000524475 EXOC6Q8TAG9 804 aa18.51■□□□□ 0.55
SF3B2-202ENST00000524475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.51■□□□□ 0.55
SF3B2-202ENST00000524475 TEKT1Q969V4 418 aa18.51■□□□□ 0.55
SF3B2-202ENST00000524475 ZDHHC15Q96MV8 337 aa18.51■□□□□ 0.55
SF3B2-202ENST00000524475 GLIS2Q9BZE0 524 aaPredicted RBP18.51■□□□□ 0.55
SF3B2-202ENST00000524475 ASTN2O75129 1339 aaPredicted RBP18.5■□□□□ 0.55
SF3B2-202ENST00000524475 MYO1BO43795 1136 aa18.5■□□□□ 0.55
SF3B2-202ENST00000524475 PRDX5P30044 214 aa18.5■□□□□ 0.55
SF3B2-202ENST00000524475 CREBZFQ9NS37 354 aa18.5■□□□□ 0.55
SF3B2-202ENST00000524475 APBB1O00213 710 aa18.49■□□□□ 0.55
SF3B2-202ENST00000524475 IFIT2P09913 472 aaKnown RBP18.49■□□□□ 0.55
SF3B2-202ENST00000524475 GCC1Q96CN9 775 aa18.49■□□□□ 0.55
SF3B2-202ENST00000524475 FAM163AQ96GL9 167 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-202ENST00000524475 PRMT6Q96LA8 375 aaPredicted RBP18.49■□□□□ 0.55
SF3B2-202ENST00000524475 MAST2Q6P0Q8 1798 aa18.49■□□□□ 0.55
SF3B2-202ENST00000524475 TMEM88BA6NKF7 163 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 SPDYE2Q495Y8 402 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 TMED8Q6PL24 325 aaPredicted RBP18.48■□□□□ 0.55
SF3B2-202ENST00000524475 USP48Q86UV5 1035 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 SLF2Q8IX21 1173 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 PPP2R3BQ9Y5P8 575 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 MYH2Q9UKX2 1941 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 GAKO14976 1311 aa18.48■□□□□ 0.55
SF3B2-202ENST00000524475 TRAF5O00463 557 aa18.47■□□□□ 0.55
SF3B2-202ENST00000524475 RBM5P52756 815 aaKnown RBP eCLIP18.47■□□□□ 0.55
SF3B2-202ENST00000524475 APOBEC3HQ6NTF7 200 aaKnown RBP18.47■□□□□ 0.55
SF3B2-202ENST00000524475 PI16Q6UXB8 463 aa18.47■□□□□ 0.55
SF3B2-202ENST00000524475 ERICH6Q7L0X2 663 aa18.47■□□□□ 0.55
SF3B2-202ENST00000524475 ABCF2Q9UG63 623 aa18.47■□□□□ 0.55
SF3B2-202ENST00000524475 PCDHAC2Q9Y5I4 1007 aa18.47■□□□□ 0.55
SF3B2-202ENST00000524475 DOCK2Q92608 1830 aa18.46■□□□□ 0.55
SF3B2-202ENST00000524475 ADM5C9JUS6 153 aa18.46■□□□□ 0.55
SF3B2-202ENST00000524475 CYP2E1P05181 493 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-202ENST00000524475 TNFAIP1Q13829 316 aa18.46■□□□□ 0.55
SF3B2-202ENST00000524475 FKBP1CQ5VVH2 108 aa18.46■□□□□ 0.55
SF3B2-202ENST00000524475 DZIP1Q86YF9 867 aaKnown RBP18.46■□□□□ 0.55
SF3B2-202ENST00000524475 RWDD1Q9H446 243 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-202ENST00000524475 DAGLAQ9Y4D2 1042 aa18.46■□□□□ 0.55
SF3B2-202ENST00000524475 ATP5JP18859 108 aa18.45■□□□□ 0.54
SF3B2-202ENST00000524475 CST9Q5W186 159 aa18.45■□□□□ 0.54
SF3B2-202ENST00000524475 ZNF70Q9UC06 446 aaPredicted RBP18.45■□□□□ 0.54
SF3B2-202ENST00000524475 AOX1Q06278 1338 aa18.45■□□□□ 0.54
SF3B2-202ENST00000524475 ZAP70P43403 619 aa18.44■□□□□ 0.54
SF3B2-202ENST00000524475 GSTO1P78417 241 aa18.44■□□□□ 0.54
SF3B2-202ENST00000524475 DIXDC1Q155Q3 683 aa18.44■□□□□ 0.54
SF3B2-202ENST00000524475 SMC5Q8IY18 1101 aa18.44■□□□□ 0.54
SF3B2-202ENST00000524475 NSUN4Q96CB9 384 aaKnown RBP18.44■□□□□ 0.54
SF3B2-202ENST00000524475 CDCA5Q96FF9 252 aa18.44■□□□□ 0.54
SF3B2-202ENST00000524475 MYO5AQ9Y4I1 1855 aaKnown RBP18.43■□□□□ 0.54
SF3B2-202ENST00000524475 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
SF3B2-202ENST00000524475 CELF2O95319 508 aaKnown RBP18.43■□□□□ 0.54
SF3B2-202ENST00000524475 MAP4K4O95819 1239 aaPredicted RBP18.43■□□□□ 0.54
SF3B2-202ENST00000524475 LDHCP07864 332 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 MECOMQ03112 1051 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 FMR1Q06787 632 aaKnown RBP eCLIP18.43■□□□□ 0.547e-8■□□□□ 10.1
SF3B2-202ENST00000524475 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 ZNF384Q8TF68 577 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 DEFB129Q9H1M3 183 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 TDRD3Q9H7E2 651 aaKnown RBP18.43■□□□□ 0.54
SF3B2-202ENST00000524475 SNRKQ9NRH2 765 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 LRP2BPQ9P2M1 347 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 MROH7-TTC4A0A0A0MT08 1334 aa18.43■□□□□ 0.54
SF3B2-202ENST00000524475 PAPPA2Q9BXP8 1791 aa18.42■□□□□ 0.54
SF3B2-202ENST00000524475 CLRN2A0PK11 232 aa18.42■□□□□ 0.54
SF3B2-202ENST00000524475 FKBP1BP68106 108 aa18.42■□□□□ 0.54
SF3B2-202ENST00000524475 TTF1Q15361 905 aaPredicted RBP18.42■□□□□ 0.54
SF3B2-202ENST00000524475 FAM83AQ86UY5 434 aa18.42■□□□□ 0.54
SF3B2-202ENST00000524475 HHIPL1Q96JK4 782 aa18.42■□□□□ 0.54
SF3B2-202ENST00000524475 TMOD2Q9NZR1 351 aa18.42■□□□□ 0.54
SF3B2-202ENST00000524475 RPAP1Q9BWH6 1393 aaPredicted RBP18.42■□□□□ 0.54
SF3B2-202ENST00000524475 GPR75-ASB3A0A0A6YYF3 556 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 RASSF10A6NK89 507 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 TNNI2P48788 182 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 GPATCH3Q96I76 525 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 VEZTQ9HBM0 779 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 ECHDC1Q9NTX5 307 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 RAI14Q9P0K7 980 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 TLL2Q9Y6L7 1015 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 TTC41PQ6P2S7 1318 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
SF3B2-202ENST00000524475 DNAJC5GQ8N7S2 189 aa18.4■□□□□ 0.54
SF3B2-202ENST00000524475 HAUS7Q99871 368 aa18.4■□□□□ 0.54
SF3B2-202ENST00000524475 GBA2Q9HCG7 927 aaPredicted RBP18.4■□□□□ 0.54
SF3B2-202ENST00000524475 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
SF3B2-202ENST00000524475 SALL3Q9BXA9 1300 aa18.4■□□□□ 0.54
SF3B2-202ENST00000524475 CNTNAP1P78357 1384 aa18.4■□□□□ 0.54
SF3B2-202ENST00000524475 NF2P35240 595 aa18.39■□□□□ 0.53
SF3B2-202ENST00000524475 RASA3Q14644 834 aa18.39■□□□□ 0.53
SF3B2-202ENST00000524475 CDC42EP5Q6NZY7 148 aa18.39■□□□□ 0.53
SF3B2-202ENST00000524475 DLK2Q6UY11 383 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms