RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 FBXO46Q6PJ61 603 aaPredicted RBP26.16■■□□□ 1.78
PABPC1-218ENST00000521865 KLHDC4Q8TBB5 520 aa26.16■■□□□ 1.78
PABPC1-218ENST00000521865 OTUD7BQ6GQQ9 843 aa26.15■■□□□ 1.78
PABPC1-218ENST00000521865 TBC1D22AQ8WUA7 517 aa26.15■■□□□ 1.78
PABPC1-218ENST00000521865 ELP3Q9H9T3 547 aa26.15■■□□□ 1.78
PABPC1-218ENST00000521865 IGF2BP3O00425 579 aaKnown RBP eCLIP26.14■■□□□ 1.786e-8■■□□□ 13.7
PABPC1-218ENST00000521865 GRIK5Q16478 980 aa26.14■■□□□ 1.78
PABPC1-218ENST00000521865 TMEM39BQ9GZU3 492 aa26.13■■□□□ 1.77
PABPC1-218ENST00000521865 USP44Q9H0E7 712 aa26.13■■□□□ 1.77
PABPC1-218ENST00000521865 IFIT1P09914 478 aaKnown RBP26.12■■□□□ 1.77
PABPC1-218ENST00000521865 BCAMP50895 628 aa26.12■■□□□ 1.77
PABPC1-218ENST00000521865 SLFN5Q08AF3 891 aa26.12■■□□□ 1.77
PABPC1-218ENST00000521865 VGLL2Q8N8G2 317 aa26.12■■□□□ 1.77
PABPC1-218ENST00000521865 TEKT1Q969V4 418 aa26.12■■□□□ 1.77
PABPC1-218ENST00000521865 SMC4Q9NTJ3 1288 aa26.12■■□□□ 1.77
PABPC1-218ENST00000521865 ECM29Q5VYK3 1845 aa26.11■■□□□ 1.77
PABPC1-218ENST00000521865 GJA5P36382 358 aa26.11■■□□□ 1.77
PABPC1-218ENST00000521865 PUM3Q15397 648 aaKnown RBP26.11■■□□□ 1.77
PABPC1-218ENST00000521865 CDAN1Q8IWY9 1227 aa26.11■■□□□ 1.77
PABPC1-218ENST00000521865 OPTNQ96CV9 577 aa26.11■■□□□ 1.77
PABPC1-218ENST00000521865 TMOD2Q9NZR1 351 aa26.11■■□□□ 1.77
PABPC1-218ENST00000521865 TRIM17Q9Y577 477 aa26.11■■□□□ 1.77
PABPC1-218ENST00000521865 HDLBPQ00341 1268 aaKnown RBP26.1■■□□□ 1.77
PABPC1-218ENST00000521865 TEPSINQ96N21 525 aa26.1■■□□□ 1.77
PABPC1-218ENST00000521865 CACNB3P54284 484 aa26.09■■□□□ 1.77
PABPC1-218ENST00000521865 ALDH1L2Q3SY69 923 aa26.09■■□□□ 1.77
PABPC1-218ENST00000521865 CRHR2Q13324 411 aa26.08■■□□□ 1.77
PABPC1-218ENST00000521865 CDCA7LQ96GN5 454 aa26.08■■□□□ 1.77
PABPC1-218ENST00000521865 CSADQ9Y600 493 aa26.08■■□□□ 1.77
PABPC1-218ENST00000521865 MAST3O60307 1309 aa26.08■■□□□ 1.77
PABPC1-218ENST00000521865 EYA2O00167 538 aa26.07■■□□□ 1.76
PABPC1-218ENST00000521865 SLC5A1P13866 664 aa26.07■■□□□ 1.76
PABPC1-218ENST00000521865 MAP3K9P80192 1104 aa26.07■■□□□ 1.76
PABPC1-218ENST00000521865 ERO1AQ96HE7 468 aa26.07■■□□□ 1.76
PABPC1-218ENST00000521865 VGLL4Q14135 290 aa26.06■■□□□ 1.76
PABPC1-218ENST00000521865 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.06■■□□□ 1.76
PABPC1-218ENST00000521865 UBTFL1P0CB47 393 aaPredicted RBP26.05■■□□□ 1.76
PABPC1-218ENST00000521865 FGFR2P21802 821 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 OTOP1Q7RTM1 612 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 CNKSR2Q8WXI2 1034 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 LPIN2Q92539 896 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 ZDHHC15Q96MV8 337 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 PTPN18Q99952 460 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 SUGT1Q9Y2Z0 365 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 KIF16BQ96L93 1317 aa26.05■■□□□ 1.76
PABPC1-218ENST00000521865 TESPA1A2RU30 521 aaPredicted RBP26.04■■□□□ 1.76
PABPC1-218ENST00000521865 RFX5P48382 616 aaPredicted RBP26.04■■□□□ 1.76
PABPC1-218ENST00000521865 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.04■■□□□ 1.761e-323■■■□□ 15.3
PABPC1-218ENST00000521865 CD99L2Q8TCZ2 262 aa26.04■■□□□ 1.76
PABPC1-218ENST00000521865 OTUD5Q96G74 571 aa26.04■■□□□ 1.76
PABPC1-218ENST00000521865 SIL1Q9H173 461 aa26.04■■□□□ 1.76
PABPC1-218ENST00000521865 ARAP2Q8WZ64 1704 aa26.03■■□□□ 1.76
PABPC1-218ENST00000521865 CCL15-CCL14A0A0B4J2E2 113 aa26.03■■□□□ 1.76
PABPC1-218ENST00000521865 SLC34A2O95436 690 aa26.03■■□□□ 1.76
PABPC1-218ENST00000521865 CCL15Q16663 113 aa26.03■■□□□ 1.76
PABPC1-218ENST00000521865 WDR66Q8TBY9 1149 aa26.03■■□□□ 1.76
PABPC1-218ENST00000521865 MRIQ9BWK5 157 aa26.03■■□□□ 1.76
PABPC1-218ENST00000521865 GTF2A2P52657 109 aa26.02■■□□□ 1.76
PABPC1-218ENST00000521865 SP3Q02447 781 aa26.02■■□□□ 1.76
PABPC1-218ENST00000521865 APOBEC3HQ6NTF7 200 aaKnown RBP26.02■■□□□ 1.76
PABPC1-218ENST00000521865 HOOK2Q96ED9 719 aa26.02■■□□□ 1.76
PABPC1-218ENST00000521865 MS4A4AQ96JQ5 239 aa26.02■■□□□ 1.76
PABPC1-218ENST00000521865 HHIPL2Q6UWX4 724 aa26.01■■□□□ 1.75
PABPC1-218ENST00000521865 FAM83AQ86UY5 434 aa26.01■■□□□ 1.75
PABPC1-218ENST00000521865 BRI3BPQ8WY22 251 aa26.01■■□□□ 1.75
PABPC1-218ENST00000521865 WRNIP1Q96S55 665 aa26.01■■□□□ 1.75
PABPC1-218ENST00000521865 EFCC1Q9HA90 598 aa26.01■■□□□ 1.75
PABPC1-218ENST00000521865 NOB1Q9ULX3 412 aaKnown RBP26.01■■□□□ 1.75
PABPC1-218ENST00000521865 TAF1CQ15572 869 aaPredicted RBP26■■□□□ 1.75
PABPC1-218ENST00000521865 ATG9AQ7Z3C6 839 aa26■■□□□ 1.75
PABPC1-218ENST00000521865 ZFYVE28Q9HCC9 887 aa26■■□□□ 1.75
PABPC1-218ENST00000521865 CEP126Q9P2H0 1117 aa26■■□□□ 1.75
PABPC1-218ENST00000521865 TNRC18O15417 2968 aaPredicted RBP26■■□□□ 1.75
PABPC1-218ENST00000521865 ATP2B3Q16720 1220 aa25.99■■□□□ 1.75
PABPC1-218ENST00000521865 FKBP1CQ5VVH2 108 aa25.99■■□□□ 1.75
PABPC1-218ENST00000521865 API5Q9BZZ5 524 aaKnown RBP25.99■■□□□ 1.75
PABPC1-218ENST00000521865 GNL3LQ9NVN8 582 aaKnown RBP25.99■■□□□ 1.75
PABPC1-218ENST00000521865 SPDYE5A6NIY4 337 aa25.98■■□□□ 1.75
PABPC1-218ENST00000521865 WDHD1O75717 1129 aaPredicted RBP25.98■■□□□ 1.75
PABPC1-218ENST00000521865 DCAF15Q66K64 600 aa25.98■■□□□ 1.75
PABPC1-218ENST00000521865 ZKSCAN4Q969J2 545 aaPredicted RBP25.98■■□□□ 1.75
PABPC1-218ENST00000521865 HDAC5Q9UQL6 1122 aa25.98■■□□□ 1.75
PABPC1-218ENST00000521865 PTPN22Q9Y2R2 807 aa25.98■■□□□ 1.75
PABPC1-218ENST00000521865 CT47B1P0C2W7 299 aaPredicted RBP25.97■■□□□ 1.75
PABPC1-218ENST00000521865 PRPF38BQ5VTL8 546 aaKnown RBP25.97■■□□□ 1.75
PABPC1-218ENST00000521865 INTS3Q68E01 1043 aaKnown RBP25.97■■□□□ 1.75
PABPC1-218ENST00000521865 ERO1BQ86YB8 467 aa25.97■■□□□ 1.75
PABPC1-218ENST00000521865 FBXO3Q9UK99 471 aa25.97■■□□□ 1.75
PABPC1-218ENST00000521865 CIAO1O76071 339 aa25.96■■□□□ 1.75
PABPC1-218ENST00000521865 MIGA2Q7L4E1 593 aa25.96■■□□□ 1.75
PABPC1-218ENST00000521865 TRMT2AQ8IZ69 625 aaKnown RBP25.96■■□□□ 1.75
PABPC1-218ENST00000521865 FAM43AQ8N2R8 423 aa25.96■■□□□ 1.75
PABPC1-218ENST00000521865 LRRFIP2Q9Y608 721 aaKnown RBP25.96■■□□□ 1.75
PABPC1-218ENST00000521865 SNCAIPQ9Y6H5 919 aa25.96■■□□□ 1.75
PABPC1-218ENST00000521865 OTOFQ9HC10 1997 aa25.95■■□□□ 1.75
PABPC1-218ENST00000521865 CETPP11597 493 aa25.95■■□□□ 1.74
PABPC1-218ENST00000521865 ARHGEF6Q15052 776 aa25.95■■□□□ 1.74
PABPC1-218ENST00000521865 DIXDC1Q155Q3 683 aa25.95■■□□□ 1.74
PABPC1-218ENST00000521865 ZNF341Q9BYN7 854 aa25.95■■□□□ 1.74
PABPC1-218ENST00000521865 LDHBP07195 334 aaKnown RBP25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms