RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 UBE3CQ15386 1083 aa20.49■□□□□ 0.87
TSNARE1-205ENST00000520166 DACT2Q5SW24 774 aa20.49■□□□□ 0.87
TSNARE1-205ENST00000520166 APPBP2Q92624 585 aa20.49■□□□□ 0.87
TSNARE1-205ENST00000520166 HELLSQ9NRZ9 838 aa20.49■□□□□ 0.87
TSNARE1-205ENST00000520166 FOXP2O15409 715 aa20.48■□□□□ 0.87
TSNARE1-205ENST00000520166 LDHBP07195 334 aaKnown RBP20.48■□□□□ 0.87
TSNARE1-205ENST00000520166 DYNLL1P63167 89 aaKnown RBP20.48■□□□□ 0.87
TSNARE1-205ENST00000520166 RUFY2Q8WXA3 655 aa20.48■□□□□ 0.87
TSNARE1-205ENST00000520166 ZFYP08048 801 aaPredicted RBP20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 NAA16Q6N069 864 aaPredicted RBP20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 ARMT1Q9H993 441 aa20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 USP17L3A6NCW0 530 aa20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 USP17L4A6NCW7 530 aa20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 ZSCAN25Q6NSZ9 544 aa20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 USP17L1Q7RTZ2 530 aa20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 RBM19Q9Y4C8 960 aaKnown RBP20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
TSNARE1-205ENST00000520166 ZNF646O15015 1829 aaPredicted RBP20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 PSMD14O00487 310 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 GPAA1O43292 621 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 PRKAB2O43741 272 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 MBD4O95243 580 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 SCNN1DP51172 638 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 LCORLQ8N3X6 602 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 C22orf23Q9BZE7 217 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 ZBTB12Q9Y330 459 aaPredicted RBP20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 CCDC171Q6TFL3 1326 aa20.46■□□□□ 0.87
TSNARE1-205ENST00000520166 STRIP1Q5VSL9 837 aa20.45■□□□□ 0.86
TSNARE1-205ENST00000520166 DZIP1Q86YF9 867 aaKnown RBP20.45■□□□□ 0.86
TSNARE1-205ENST00000520166 NIM1KQ8IY84 436 aa20.45■□□□□ 0.86
TSNARE1-205ENST00000520166 PALD1Q9ULE6 856 aa20.45■□□□□ 0.86
TSNARE1-205ENST00000520166 ZNRF3Q9ULT6 936 aa20.45■□□□□ 0.86
TSNARE1-205ENST00000520166 CXCL9Q07325 125 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 SPTY2D1Q68D10 685 aaPredicted RBP20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 KIAA0825Q8IV33 1275 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 TBC1D32Q96NH3 1257 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 STRBPQ96SI9 672 aaKnown RBP20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 TAF6LQ9Y6J9 622 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 LTBP3Q9NS15 1303 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 REC8O95072 547 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 ZGPATQ8N5A5 531 aaKnown RBP20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 VPS33BQ9H267 617 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 AATFQ9NY61 560 aaKnown RBP eCLIP20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 CCDC88AQ3V6T2 1871 aa20.44■□□□□ 0.86
TSNARE1-205ENST00000520166 RAD50Q92878 1312 aa20.43■□□□□ 0.86
TSNARE1-205ENST00000520166 HSPD1P10809 573 aaKnown RBP20.43■□□□□ 0.86
TSNARE1-205ENST00000520166 LRRFIP1Q32MZ4 808 aaKnown RBP20.43■□□□□ 0.86
TSNARE1-205ENST00000520166 RIOK1Q9BRS2 568 aaKnown RBP20.43■□□□□ 0.86
TSNARE1-205ENST00000520166 KIAA1211Q6ZU35 1233 aa20.42■□□□□ 0.86
TSNARE1-205ENST00000520166 TICAM2Q86XR7 235 aa20.42■□□□□ 0.86
TSNARE1-205ENST00000520166 MAP4K1Q92918 833 aa20.42■□□□□ 0.86
TSNARE1-205ENST00000520166 ADAMTSL1Q8N6G6 1762 aa20.42■□□□□ 0.86
TSNARE1-205ENST00000520166 MAGEB6P1A0A0J9YX57 407 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 SHTN1A0MZ66 631 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 JDP2Q8WYK2 163 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 AIDAQ96BJ3 306 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 KIF2CQ99661 725 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 RBM8AQ9Y5S9 174 aaKnown RBP20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 VIL1P09327 827 aaKnown RBP20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 COL9A3Q14050 684 aaPredicted RBP20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 GPR162Q16538 588 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 RASEFQ8IZ41 740 aa20.41■□□□□ 0.86
TSNARE1-205ENST00000520166 SMIM22K7EJ46 135 aa20.4■□□□□ 0.86
TSNARE1-205ENST00000520166 SDR42E1Q8WUS8 393 aa20.4■□□□□ 0.86
TSNARE1-205ENST00000520166 RSBN1LQ6PCB5 846 aaPredicted RBP20.39■□□□□ 0.86
TSNARE1-205ENST00000520166 SH3RF3Q8TEJ3 882 aaPredicted RBP20.39■□□□□ 0.86
TSNARE1-205ENST00000520166 GMLQ99445 158 aa20.39■□□□□ 0.86
TSNARE1-205ENST00000520166 UPF2Q9HAU5 1272 aaKnown RBP20.39■□□□□ 0.86
TSNARE1-205ENST00000520166 EPB41L4AQ9HCS5 686 aaPredicted RBP20.39■□□□□ 0.86
TSNARE1-205ENST00000520166 DAGLAQ9Y4D2 1042 aa20.39■□□□□ 0.86
TSNARE1-205ENST00000520166 MROH7-TTC4A0A0A0MT08 1334 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 ZNF541Q9H0D2 1346 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 MYH2Q9UKX2 1941 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 GSG1L2A8MUP6 293 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 FZD9O00144 591 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 RBM25P49756 843 aaKnown RBP20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 NECTIN1Q15223 517 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 SLC4A4Q9Y6R1 1079 aa20.39■□□□□ 0.85
TSNARE1-205ENST00000520166 LMNB1P20700 586 aa20.38■□□□□ 0.85
TSNARE1-205ENST00000520166 HSPA4P34932 840 aa20.38■□□□□ 0.85
TSNARE1-205ENST00000520166 BTDP43251 543 aa20.38■□□□□ 0.85
TSNARE1-205ENST00000520166 EVX2Q03828 476 aa20.38■□□□□ 0.85
TSNARE1-205ENST00000520166 SBF1O95248 1867 aa20.38■□□□□ 0.85
TSNARE1-205ENST00000520166 FGAP02671 866 aa20.37■□□□□ 0.85
TSNARE1-205ENST00000520166 APPP05067 770 aa20.37■□□□□ 0.85
TSNARE1-205ENST00000520166 FKBP1AP62942 108 aaKnown RBP20.37■□□□□ 0.85
TSNARE1-205ENST00000520166 CIAPIN1Q6FI81 312 aa20.37■□□□□ 0.85
TSNARE1-205ENST00000520166 MAST2Q6P0Q8 1798 aa20.37■□□□□ 0.85
TSNARE1-205ENST00000520166 GPR75-ASB3A0A0A6YYF3 556 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 CRKP46108 304 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 CREB3L3Q68CJ9 461 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 DSCC1Q9BVC3 393 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 SUGT1Q9Y2Z0 365 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 GJA3Q9Y6H8 435 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 GAKO14976 1311 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 PSME4Q14997 1843 aa20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 PATL2C9JE40 543 aaKnown RBP20.36■□□□□ 0.85
TSNARE1-205ENST00000520166 SLC27A2O14975 620 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms