RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 RBM5P52756 815 aaKnown RBP eCLIP30.48■■■□□ 2.47
PVT1-204ENST00000517525 TIMM10P62072 90 aa30.48■■■□□ 2.47
PVT1-204ENST00000517525 CCDC102BQ68D86 513 aa30.48■■■□□ 2.47
PVT1-204ENST00000517525 NOP58Q9Y2X3 529 aaKnown RBP30.48■■■□□ 2.47
PVT1-204ENST00000517525 AOX1Q06278 1338 aa30.47■■■□□ 2.47
PVT1-204ENST00000517525 ADORA1P30542 326 aa30.47■■■□□ 2.47
PVT1-204ENST00000517525 PRAMEF18Q5VWM3 479 aa30.47■■■□□ 2.47
PVT1-204ENST00000517525 AIDAQ96BJ3 306 aa30.47■■■□□ 2.47
PVT1-204ENST00000517525 GPR108Q9NPR9 543 aa30.47■■■□□ 2.47
PVT1-204ENST00000517525 FOXN1O15353 648 aa30.46■■■□□ 2.47
PVT1-204ENST00000517525 AOC2O75106 756 aa30.46■■■□□ 2.47
PVT1-204ENST00000517525 HHIPL2Q6UWX4 724 aa30.46■■■□□ 2.47
PVT1-204ENST00000517525 TEKT1Q969V4 418 aa30.46■■■□□ 2.47
PVT1-204ENST00000517525 XAGE2Q96GT9 111 aa30.46■■■□□ 2.47
PVT1-204ENST00000517525 ZDHHC15Q96MV8 337 aa30.46■■■□□ 2.47
PVT1-204ENST00000517525 ZNF70Q9UC06 446 aaPredicted RBP30.46■■■□□ 2.47
PVT1-204ENST00000517525 ECM29Q5VYK3 1845 aa30.45■■■□□ 2.47
PVT1-204ENST00000517525 CLRN2A0PK11 232 aa30.45■■■□□ 2.47
PVT1-204ENST00000517525 TNFAIP1Q13829 316 aa30.45■■■□□ 2.47
PVT1-204ENST00000517525 MVPQ14764 893 aaKnown RBP30.45■■■□□ 2.47
PVT1-204ENST00000517525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.45■■■□□ 2.47
PVT1-204ENST00000517525 SLC10A3P09131 477 aa30.44■■■□□ 2.46
PVT1-204ENST00000517525 CTCFP49711 727 aaPredicted RBP30.44■■■□□ 2.46
PVT1-204ENST00000517525 ZNF157P51786 506 aaPredicted RBP30.44■■■□□ 2.46
PVT1-204ENST00000517525 GRM1Q13255 1194 aa30.44■■■□□ 2.46
PVT1-204ENST00000517525 C1orf115Q9H7X2 142 aa30.44■■■□□ 2.46
PVT1-204ENST00000517525 DDX19BQ9UMR2 479 aa30.43■■■□□ 2.46
PVT1-204ENST00000517525 MAP3K11Q16584 847 aa30.42■■■□□ 2.46
PVT1-204ENST00000517525 SUPT20HL1Q3ZLR7 823 aa30.42■■■□□ 2.46
PVT1-204ENST00000517525 CEP85Q6P2H3 762 aa30.42■■■□□ 2.46
PVT1-204ENST00000517525 TDRD3Q9H7E2 651 aaKnown RBP30.42■■■□□ 2.46
PVT1-204ENST00000517525 VEZTQ9HBM0 779 aa30.42■■■□□ 2.46
PVT1-204ENST00000517525 PRDM10Q9NQV6 1147 aa30.42■■■□□ 2.46
PVT1-204ENST00000517525 UNCXA6NJT0 531 aa30.41■■■□□ 2.46
PVT1-204ENST00000517525 RASA3Q14644 834 aa30.41■■■□□ 2.46
PVT1-204ENST00000517525 LDLRAD1Q5T700 205 aa30.41■■■□□ 2.46
PVT1-204ENST00000517525 FKBP1CQ5VVH2 108 aa30.41■■■□□ 2.46
PVT1-204ENST00000517525 APOBEC3HQ6NTF7 200 aaKnown RBP30.41■■■□□ 2.46
PVT1-204ENST00000517525 ARMC9Q7Z3E5 817 aa30.41■■■□□ 2.46
PVT1-204ENST00000517525 ZGPATQ8N5A5 531 aaKnown RBP30.41■■■□□ 2.46
PVT1-204ENST00000517525 CHMP4BQ9H444 224 aaKnown RBP30.41■■■□□ 2.46
PVT1-204ENST00000517525 CA12O43570 354 aa30.4■■■□□ 2.46
PVT1-204ENST00000517525 RASGRF1Q13972 1273 aa30.4■■■□□ 2.46
PVT1-204ENST00000517525 PDE3AQ14432 1141 aa30.4■■■□□ 2.46
PVT1-204ENST00000517525 COL13A1Q5TAT6 717 aaPredicted RBP30.4■■■□□ 2.46
PVT1-204ENST00000517525 UBE2Q2LH0YL09 131 aa30.39■■■□□ 2.46
PVT1-204ENST00000517525 SURF6O75683 361 aaKnown RBP30.39■■■□□ 2.46
PVT1-204ENST00000517525 MOB2Q70IA6 237 aa30.39■■■□□ 2.46
PVT1-204ENST00000517525 RASAL3Q86YV0 1011 aa30.39■■■□□ 2.46
PVT1-204ENST00000517525 REM2Q8IYK8 340 aaPredicted RBP30.39■■■□□ 2.46
PVT1-204ENST00000517525 BEGAINQ9BUH8 593 aa30.39■■■□□ 2.46
PVT1-204ENST00000517525 ZBTB40Q9NUA8 1239 aa30.39■■■□□ 2.46
PVT1-204ENST00000517525 LDHBP07195 334 aaKnown RBP30.38■■■□□ 2.45
PVT1-204ENST00000517525 NEUROD6Q96NK8 337 aa30.38■■■□□ 2.45
PVT1-204ENST00000517525 ZIC5Q96T25 663 aa30.38■■■□□ 2.45
PVT1-204ENST00000517525 PRDX5P30044 214 aa30.37■■■□□ 2.45
PVT1-204ENST00000517525 TTLL12Q14166 644 aaPredicted RBP30.37■■■□□ 2.45
PVT1-204ENST00000517525 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.37■■■□□ 2.45
PVT1-204ENST00000517525 SSC5DA1L4H1 1573 aa30.37■■■□□ 2.45
PVT1-204ENST00000517525 PPP1R12BO60237 982 aaPredicted RBP30.36■■■□□ 2.45
PVT1-204ENST00000517525 HSPA8P11142 646 aaKnown RBP30.36■■■□□ 2.45
PVT1-204ENST00000517525 ARID4AP29374 1257 aaPredicted RBP30.36■■■□□ 2.45
PVT1-204ENST00000517525 TNNI2P48788 182 aa30.36■■■□□ 2.45
PVT1-204ENST00000517525 RPAP2Q8IXW5 612 aaPredicted RBP30.36■■■□□ 2.45
PVT1-204ENST00000517525 TEPSINQ96N21 525 aa30.36■■■□□ 2.45
PVT1-204ENST00000517525 COG6Q9Y2V7 657 aa30.36■■■□□ 2.45
PVT1-204ENST00000517525 MYH13Q9UKX3 1938 aa30.35■■■□□ 2.45
PVT1-204ENST00000517525 KIF23Q02241 960 aaPredicted RBP30.35■■■□□ 2.45
PVT1-204ENST00000517525 TNNI3KQ59H18 835 aa30.35■■■□□ 2.45
PVT1-204ENST00000517525 NBPF12Q5TAG4 269 aaPredicted RBP30.35■■■□□ 2.45
PVT1-204ENST00000517525 FAM83AQ86UY5 434 aa30.35■■■□□ 2.45
PVT1-204ENST00000517525 FPGT-TNNI3KV9GXZ4 949 aa30.35■■■□□ 2.45
PVT1-204ENST00000517525 OS9Q13438 667 aaPredicted RBP30.34■■■□□ 2.45
PVT1-204ENST00000517525 SPTY2D1Q68D10 685 aaPredicted RBP30.34■■■□□ 2.45
PVT1-204ENST00000517525 DAGLAQ9Y4D2 1042 aa30.34■■■□□ 2.45
PVT1-204ENST00000517525 UQCRFS1P1P0C7P4 283 aa30.33■■■□□ 2.45
PVT1-204ENST00000517525 GORABQ5T7V8 394 aa30.33■■■□□ 2.45
PVT1-204ENST00000517525 FAM163AQ96GL9 167 aaPredicted RBP30.33■■■□□ 2.45
PVT1-204ENST00000517525 ZNF512BQ96KM6 892 aaPredicted RBP30.33■■■□□ 2.45
PVT1-204ENST00000517525 TMOD2Q9NZR1 351 aa30.33■■■□□ 2.45
PVT1-204ENST00000517525 HMG20BQ9P0W2 317 aa30.33■■■□□ 2.45
PVT1-204ENST00000517525 ANGEL1Q9UNK9 670 aaKnown RBP30.33■■■□□ 2.45
PVT1-204ENST00000517525 GAKO14976 1311 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 TCP10L2B9ZVM9 353 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 LBX1P52954 281 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 DIXDC1Q155Q3 683 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 ERC1Q8IUD2 1116 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 SPATA5Q8NB90 893 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 CSRNP1Q96S65 589 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 SAGE1Q9NXZ1 904 aa30.31■■■□□ 2.44
PVT1-204ENST00000517525 USP2O75604 605 aaPredicted RBP30.3■■■□□ 2.44
PVT1-204ENST00000517525 HSP90AB4PQ58FF6 505 aa30.3■■■□□ 2.44
PVT1-204ENST00000517525 SLF2Q8IX21 1173 aa30.3■■■□□ 2.44
PVT1-204ENST00000517525 IREB2P48200 963 aaKnown RBP30.29■■■□□ 2.44
PVT1-204ENST00000517525 PRKG1Q13976 671 aa30.29■■■□□ 2.44
PVT1-204ENST00000517525 TMEM39BQ9GZU3 492 aa30.29■■■□□ 2.44
PVT1-204ENST00000517525 RPAP1Q9BWH6 1393 aaPredicted RBP30.28■■■□□ 2.44
PVT1-204ENST00000517525 IGSF3O75054 1194 aa30.28■■■□□ 2.44
PVT1-204ENST00000517525 CDC42EP5Q6NZY7 148 aa30.28■■■□□ 2.44
PVT1-204ENST00000517525 DBNDD2Q9BQY9 259 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms