RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 SUGT1Q9Y2Z0 365 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 COL1A1P02452 1464 aaPredicted RBP13.09□□□□□ -0.31
PFDN1-204ENST00000512707 MAST3O60307 1309 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 RAD50Q92878 1312 aa13.09□□□□□ -0.31
PFDN1-204ENST00000512707 REC8O95072 547 aa13.08□□□□□ -0.32
PFDN1-204ENST00000512707 LMNB1P20700 586 aa13.08□□□□□ -0.32
PFDN1-204ENST00000512707 FKBP1AP62942 108 aaKnown RBP13.08□□□□□ -0.32
PFDN1-204ENST00000512707 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
PFDN1-204ENST00000512707 NOL10Q9BSC4 688 aaKnown RBP13.08□□□□□ -0.32
PFDN1-204ENST00000512707 MYO3BQ8WXR4 1341 aa13.08□□□□□ -0.32
PFDN1-204ENST00000512707 AKAP11Q9UKA4 1901 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 LDHCP07864 332 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 PDE6AP16499 860 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 RASSF7Q02833 373 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 TNIP1Q15025 636 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 UBE3CQ15386 1083 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 NAA16Q6N069 864 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-204ENST00000512707 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
PFDN1-204ENST00000512707 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
PFDN1-204ENST00000512707 HELLSQ9NRZ9 838 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 JAG2Q9Y219 1238 aa13.07□□□□□ -0.32
PFDN1-204ENST00000512707 ADD2P35612 726 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
PFDN1-204ENST00000512707 NMIQ13287 307 aaPredicted RBP13.06□□□□□ -0.32
PFDN1-204ENST00000512707 MCMDC2Q4G0Z9 681 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 CERS3Q8IU89 383 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 MAGEB6Q8N7X4 407 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 APPBP2Q92624 585 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 ESYT1Q9BSJ8 1104 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 BACH2Q9BYV9 841 aa13.06□□□□□ -0.32
PFDN1-204ENST00000512707 KIF3CO14782 793 aa13.05□□□□□ -0.32
PFDN1-204ENST00000512707 CYP7A1P22680 504 aa13.05□□□□□ -0.32
PFDN1-204ENST00000512707 MECOMQ03112 1051 aa13.05□□□□□ -0.32
PFDN1-204ENST00000512707 ZMYM1Q5SVZ6 1142 aa13.05□□□□□ -0.32
PFDN1-204ENST00000512707 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
PFDN1-204ENST00000512707 ZNF532Q9HCE3 1301 aa13.05□□□□□ -0.32
PFDN1-204ENST00000512707 MAST2Q6P0Q8 1798 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 DOCK2Q92608 1830 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 SGSM2O43147 1006 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 RAD17O75943 681 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 PRDX5P30044 214 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 DACT2Q5SW24 774 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 CIAPIN1Q6FI81 312 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 FAM227BQ96M60 508 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 ANO2Q9NQ90 1003 aa13.04□□□□□ -0.32
PFDN1-204ENST00000512707 A0A0D9SFI3 127 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 BAG3O95817 575 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 MCCP23508 829 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 MMP14P50281 582 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 RSBN1LQ6PCB5 846 aaPredicted RBP13.03□□□□□ -0.32
PFDN1-204ENST00000512707 OGFOD1Q8N543 542 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 NSUN4Q96CB9 384 aaKnown RBP13.03□□□□□ -0.32
PFDN1-204ENST00000512707 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 HDAC9Q9UKV0 1011 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 TTF2Q9UNY4 1162 aaKnown RBP13.03□□□□□ -0.32
PFDN1-204ENST00000512707 CCDC171Q6TFL3 1326 aa13.03□□□□□ -0.32
PFDN1-204ENST00000512707 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.33
PFDN1-204ENST00000512707 PSMD14O00487 310 aa13.02□□□□□ -0.33
PFDN1-204ENST00000512707 EPB41L2O43491 1005 aaKnown RBP13.02□□□□□ -0.33
PFDN1-204ENST00000512707 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.33
PFDN1-204ENST00000512707 PLCG2P16885 1265 aa13.02□□□□□ -0.33
PFDN1-204ENST00000512707 GNAT2P19087 354 aa13.02□□□□□ -0.33
PFDN1-204ENST00000512707 RPS12P25398 132 aaKnown RBP13.02□□□□□ -0.33
PFDN1-204ENST00000512707 AGBL3Q8NEM8 1001 aa13.02□□□□□ -0.33
PFDN1-204ENST00000512707 TEKT1Q969V4 418 aa13.02□□□□□ -0.33
PFDN1-204ENST00000512707 MYH7P12883 1935 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 TCRBV5S4A2TA0A5A2 114 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 F8W031 263 aaPredicted RBP13.01□□□□□ -0.33
PFDN1-204ENST00000512707 FZD9O00144 591 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 HDLBPQ00341 1268 aaKnown RBP13.01□□□□□ -0.33
PFDN1-204ENST00000512707 CXCL9Q07325 125 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 KIAA0825Q8IV33 1275 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 OSBP2Q969R2 916 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 DDRGK1Q96HY6 314 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 KCNQ5Q9NR82 932 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 CCDC88AQ3V6T2 1871 aa13.01□□□□□ -0.33
PFDN1-204ENST00000512707 COL4A5P29400 1685 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 ZC3H4Q9UPT8 1303 aaKnown RBP13□□□□□ -0.33
PFDN1-204ENST00000512707 GPAA1O43292 621 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 MBD4O95243 580 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
PFDN1-204ENST00000512707 CERS5Q8N5B7 392 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
PFDN1-204ENST00000512707 MRIQ9BWK5 157 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 CRNKL1Q9BZJ0 848 aaKnown RBP13□□□□□ -0.33
PFDN1-204ENST00000512707 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 PUS7LQ9H0K6 701 aaKnown RBP13□□□□□ -0.33
PFDN1-204ENST00000512707 SERPINA10Q9UK55 444 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 GJA3Q9Y6H8 435 aa13□□□□□ -0.33
PFDN1-204ENST00000512707 WDR90Q96KV7 1748 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 RPAP1Q9BWH6 1393 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-204ENST00000512707 M0R2C6 588 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 APPP05067 770 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 USP17L8P0C7I0 530 aa12.99□□□□□ -0.33
PFDN1-204ENST00000512707 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
PFDN1-204ENST00000512707 APLP1P51693 650 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms