RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
SNF8-206ENST00000509989 CRBNQ96SW2 442 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 IL1RAPL2Q9NP60 686 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 HMG20BQ9P0W2 317 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 DBNLQ9UJU6 430 aaKnown RBP16.76■□□□□ 0.27
SNF8-206ENST00000509989 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 SSC5DA1L4H1 1573 aa16.76■□□□□ 0.27
SNF8-206ENST00000509989 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 MCAMP43121 646 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 GRM1Q13255 1194 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 DEFB115Q30KQ5 88 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 TBC1D9Q6ZT07 1266 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 SAPCD2Q86UD0 394 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 JMYQ8N9B5 988 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 ZNF384Q8TF68 577 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 ZIC5Q96T25 663 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 SNRKQ9NRH2 765 aa16.75■□□□□ 0.27
SNF8-206ENST00000509989 AOC2O75106 756 aa16.74■□□□□ 0.27
SNF8-206ENST00000509989 RPAP2Q8IXW5 612 aaPredicted RBP16.74■□□□□ 0.27
SNF8-206ENST00000509989 VEZTQ9HBM0 779 aa16.74■□□□□ 0.27
SNF8-206ENST00000509989 ZNF70Q9UC06 446 aaPredicted RBP16.74■□□□□ 0.27
SNF8-206ENST00000509989 PCDHB15Q9Y5E8 787 aa16.74■□□□□ 0.27
SNF8-206ENST00000509989 NDUFB9Q9Y6M9 179 aa16.74■□□□□ 0.27
SNF8-206ENST00000509989 OTOFQ9HC10 1997 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 PRKG1Q13976 671 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 APOBEC3HQ6NTF7 200 aaKnown RBP16.73■□□□□ 0.27
SNF8-206ENST00000509989 WDR66Q8TBY9 1149 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 GBA2Q9HCG7 927 aaPredicted RBP16.73■□□□□ 0.27
SNF8-206ENST00000509989 GPR108Q9NPR9 543 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 SERPINA10Q9UK55 444 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 DENND2AQ9ULE3 1009 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 THSD7BQ9C0I4 1608 aa16.73■□□□□ 0.27
SNF8-206ENST00000509989 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
SNF8-206ENST00000509989 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
SNF8-206ENST00000509989 PAXIP1Q6ZW49 1069 aaPredicted RBP16.72■□□□□ 0.27
SNF8-206ENST00000509989 RHPN1Q8TCX5 695 aa16.72■□□□□ 0.27
SNF8-206ENST00000509989 GNL3LQ9NVN8 582 aaKnown RBP16.72■□□□□ 0.27
SNF8-206ENST00000509989 DAGLAQ9Y4D2 1042 aa16.72■□□□□ 0.27
SNF8-206ENST00000509989 WDR33Q9C0J8 1336 aaKnown RBP16.71■□□□□ 0.27
SNF8-206ENST00000509989 SALL1Q9NSC2 1324 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 CDK5RAP2Q96SN8 1893 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 AK9Q5TCS8 1911 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 TCP10L2B9ZVM9 353 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 SMARCA5O60264 1052 aaPredicted RBP16.71■□□□□ 0.27
SNF8-206ENST00000509989 HUNKP57058 714 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 SPATA5Q8NB90 893 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 TEKT1Q969V4 418 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 CAPNS2Q96L46 248 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 DEFB129Q9H1M3 183 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
SNF8-206ENST00000509989 SEMA3EO15041 775 aa16.7■□□□□ 0.26
SNF8-206ENST00000509989 MMP14P50281 582 aa16.7■□□□□ 0.26
SNF8-206ENST00000509989 RASA3Q14644 834 aa16.7■□□□□ 0.26
SNF8-206ENST00000509989 NBPF12Q5TAG4 269 aaPredicted RBP16.7■□□□□ 0.26
SNF8-206ENST00000509989 AACSQ86V21 672 aa16.7■□□□□ 0.26
SNF8-206ENST00000509989 APOBEC3FQ8IUX4 373 aaKnown RBP16.7■□□□□ 0.26
SNF8-206ENST00000509989 ZDHHC15Q96MV8 337 aa16.7■□□□□ 0.26
SNF8-206ENST00000509989 DOCK2Q92608 1830 aa16.7■□□□□ 0.26
SNF8-206ENST00000509989 LDHBP07195 334 aaKnown RBP16.69■□□□□ 0.26
SNF8-206ENST00000509989 HDLBPQ00341 1268 aaKnown RBP16.69■□□□□ 0.26
SNF8-206ENST00000509989 TEPSINQ96N21 525 aa16.69■□□□□ 0.26
SNF8-206ENST00000509989 TMEM39BQ9GZU3 492 aa16.69■□□□□ 0.26
SNF8-206ENST00000509989 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
SNF8-206ENST00000509989 FAM155AB1AL88 458 aaPredicted RBP16.68■□□□□ 0.26
SNF8-206ENST00000509989 ZBTB22O15209 634 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 CYP2E1P05181 493 aaPredicted RBP16.68■□□□□ 0.26
SNF8-206ENST00000509989 ZAP70P43403 619 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 NFIAQ12857 509 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 CDC42EP5Q6NZY7 148 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 HHIPL2Q6UWX4 724 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 C2orf69Q8N8R5 385 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
SNF8-206ENST00000509989 SUGT1Q9Y2Z0 365 aa16.68■□□□□ 0.26
SNF8-206ENST00000509989 PDS5AQ29RF7 1337 aaKnown RBP16.68■□□□□ 0.26
SNF8-206ENST00000509989 HSPA1AP0DMV8 641 aaKnown RBP16.67■□□□□ 0.26
SNF8-206ENST00000509989 HSPA1BP0DMV9 641 aaKnown RBP16.67■□□□□ 0.26
SNF8-206ENST00000509989 SLURP2P0DP57 97 aa16.67■□□□□ 0.26
SNF8-206ENST00000509989 MECOMQ03112 1051 aa16.67■□□□□ 0.26
SNF8-206ENST00000509989 ZFPM1Q8IX07 1006 aa16.67■□□□□ 0.26
SNF8-206ENST00000509989 MRIQ9BWK5 157 aa16.67■□□□□ 0.26
SNF8-206ENST00000509989 ANTXR1Q9H6X2 564 aa16.67■□□□□ 0.26
SNF8-206ENST00000509989 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.67■□□□□ 0.26
SNF8-206ENST00000509989 SUPT16HQ9Y5B9 1047 aaKnown RBP16.67■□□□□ 0.26
SNF8-206ENST00000509989 MYO1BO43795 1136 aa16.66■□□□□ 0.26
SNF8-206ENST00000509989 HMMRO75330 724 aa16.66■□□□□ 0.26
SNF8-206ENST00000509989 GAKO14976 1311 aa16.66■□□□□ 0.26
SNF8-206ENST00000509989 UQCRFS1P1P0C7P4 283 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 IRX6P78412 446 aaPredicted RBP16.65■□□□□ 0.26
SNF8-206ENST00000509989 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
SNF8-206ENST00000509989 CCDC158Q5M9N0 1113 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 RGMBQ6NW40 437 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 ADGRA1Q86SQ6 560 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 ERC1Q8IUD2 1116 aa16.65■□□□□ 0.26
SNF8-206ENST00000509989 EXOC6Q8TAG9 804 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms