RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 VEGFBP49765 207 aa20.87■□□□□ 0.93
CLDND1-219ENST00000508659 TNNI3KQ59H18 835 aa20.87■□□□□ 0.93
CLDND1-219ENST00000508659 ZGPATQ8N5A5 531 aaKnown RBP20.87■□□□□ 0.93
CLDND1-219ENST00000508659 C2orf69Q8N8R5 385 aa20.87■□□□□ 0.93
CLDND1-219ENST00000508659 PRMT6Q96LA8 375 aaPredicted RBP20.87■□□□□ 0.93
CLDND1-219ENST00000508659 EXOC6BQ9Y2D4 811 aa20.87■□□□□ 0.93
CLDND1-219ENST00000508659 FPGT-TNNI3KV9GXZ4 949 aa20.87■□□□□ 0.93
CLDND1-219ENST00000508659 SALL1Q9NSC2 1324 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 ZBTB22O15209 634 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 NF2P35240 595 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 ECE1P42892 770 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 HUNKP57058 714 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 HDLBPQ00341 1268 aaKnown RBP20.86■□□□□ 0.93
CLDND1-219ENST00000508659 GRM1Q13255 1194 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 HSP90AB4PQ58FF6 505 aa20.86■□□□□ 0.93
CLDND1-219ENST00000508659 ECM29Q5VYK3 1845 aa20.85■□□□□ 0.93
CLDND1-219ENST00000508659 PAPPA2Q9BXP8 1791 aa20.85■□□□□ 0.93
CLDND1-219ENST00000508659 LDHBP07195 334 aaKnown RBP20.85■□□□□ 0.93
CLDND1-219ENST00000508659 TNFAIP1Q13829 316 aa20.85■□□□□ 0.93
CLDND1-219ENST00000508659 HHIPL1Q96JK4 782 aa20.85■□□□□ 0.93
CLDND1-219ENST00000508659 PPP2R3BQ9Y5P8 575 aa20.85■□□□□ 0.93
CLDND1-219ENST00000508659 PRDX5P30044 214 aa20.84■□□□□ 0.93
CLDND1-219ENST00000508659 FKBP1BP68106 108 aa20.84■□□□□ 0.93
CLDND1-219ENST00000508659 SPDYE2Q495Y8 402 aa20.84■□□□□ 0.93
CLDND1-219ENST00000508659 CYP4F22Q6NT55 531 aa20.84■□□□□ 0.93
CLDND1-219ENST00000508659 CAPNS2Q96L46 248 aa20.84■□□□□ 0.93
CLDND1-219ENST00000508659 DEFB129Q9H1M3 183 aa20.84■□□□□ 0.93
CLDND1-219ENST00000508659 AOX1Q06278 1338 aa20.83■□□□□ 0.93
CLDND1-219ENST00000508659 WDR33Q9C0J8 1336 aaKnown RBP20.83■□□□□ 0.93
CLDND1-219ENST00000508659 ARID4AP29374 1257 aaPredicted RBP20.83■□□□□ 0.93
CLDND1-219ENST00000508659 TTC39AQ5SRH9 613 aa20.83■□□□□ 0.93
CLDND1-219ENST00000508659 PRAMEF18Q5VWM3 479 aa20.83■□□□□ 0.93
CLDND1-219ENST00000508659 ZDHHC15Q96MV8 337 aa20.83■□□□□ 0.93
CLDND1-219ENST00000508659 TDRD3Q9H7E2 651 aaKnown RBP20.83■□□□□ 0.93
CLDND1-219ENST00000508659 THSD7BQ9C0I4 1608 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 UQCRFS1P1P0C7P4 283 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 TTLL12Q14166 644 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-219ENST00000508659 CCDC158Q5M9N0 1113 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 DZIP1Q86YF9 867 aaKnown RBP20.82■□□□□ 0.92
CLDND1-219ENST00000508659 SPATA5Q8NB90 893 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 DBNDD2Q9BQY9 259 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 TMOD2Q9NZR1 351 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 ZNF70Q9UC06 446 aaPredicted RBP20.82■□□□□ 0.92
CLDND1-219ENST00000508659 ABCF2Q9UG63 623 aa20.82■□□□□ 0.92
CLDND1-219ENST00000508659 DIXDC1Q155Q3 683 aa20.81■□□□□ 0.92
CLDND1-219ENST00000508659 HHIPL2Q6UWX4 724 aa20.81■□□□□ 0.92
CLDND1-219ENST00000508659 SIRT2Q8IXJ6 389 aa20.81■□□□□ 0.92
CLDND1-219ENST00000508659 MRIQ9BWK5 157 aa20.81■□□□□ 0.92
CLDND1-219ENST00000508659 HMG20BQ9P0W2 317 aa20.81■□□□□ 0.92
CLDND1-219ENST00000508659 POLR2AP24928 1970 aaKnown RBP20.8■□□□□ 0.92
CLDND1-219ENST00000508659 APBB1O00213 710 aa20.8■□□□□ 0.92
CLDND1-219ENST00000508659 TNNI2P48788 182 aa20.8■□□□□ 0.92
CLDND1-219ENST00000508659 SPTY2D1Q68D10 685 aaPredicted RBP20.8■□□□□ 0.92
CLDND1-219ENST00000508659 PI16Q6UXB8 463 aa20.8■□□□□ 0.92
CLDND1-219ENST00000508659 RHPN1Q8TCX5 695 aa20.8■□□□□ 0.92
CLDND1-219ENST00000508659 DBNLQ9UJU6 430 aaKnown RBP20.8■□□□□ 0.92
CLDND1-219ENST00000508659 DAGLAQ9Y4D2 1042 aa20.8■□□□□ 0.92
CLDND1-219ENST00000508659 MCAMP43121 646 aa20.79■□□□□ 0.92
CLDND1-219ENST00000508659 RASA3Q14644 834 aa20.79■□□□□ 0.92
CLDND1-219ENST00000508659 RGMBQ6NW40 437 aa20.79■□□□□ 0.92
CLDND1-219ENST00000508659 AACSQ86V21 672 aa20.79■□□□□ 0.92
CLDND1-219ENST00000508659 EAF2Q96CJ1 260 aaPredicted RBP20.79■□□□□ 0.92
CLDND1-219ENST00000508659 KIF1BPQ96EK5 621 aa20.79■□□□□ 0.92
CLDND1-219ENST00000508659 TLR7Q9NYK1 1049 aaKnown RBP20.79■□□□□ 0.92
CLDND1-219ENST00000508659 SSC5DA1L4H1 1573 aa20.78■□□□□ 0.92
CLDND1-219ENST00000508659 TCP10L2B9ZVM9 353 aa20.78■□□□□ 0.92
CLDND1-219ENST00000508659 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
CLDND1-219ENST00000508659 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
CLDND1-219ENST00000508659 APOBEC3HQ6NTF7 200 aaKnown RBP20.78■□□□□ 0.92
CLDND1-219ENST00000508659 CCDC8Q9H0W5 538 aaPredicted RBP20.78■□□□□ 0.92
CLDND1-219ENST00000508659 IL1RAPL2Q9NP60 686 aa20.78■□□□□ 0.92
CLDND1-219ENST00000508659 RAB11FIP3O75154 756 aa20.77■□□□□ 0.92
CLDND1-219ENST00000508659 ZNF157P51786 506 aaPredicted RBP20.77■□□□□ 0.92
CLDND1-219ENST00000508659 CACNB3P54284 484 aa20.77■□□□□ 0.92
CLDND1-219ENST00000508659 SUPT20HL1Q3ZLR7 823 aa20.77■□□□□ 0.92
CLDND1-219ENST00000508659 ERICH6Q7L0X2 663 aa20.77■□□□□ 0.92
CLDND1-219ENST00000508659 SLF2Q8IX21 1173 aa20.77■□□□□ 0.92
CLDND1-219ENST00000508659 CLASRPQ8N2M8 674 aaKnown RBP20.77■□□□□ 0.92
CLDND1-219ENST00000508659 PCNTO95613 3336 aa20.76■□□□□ 0.91
CLDND1-219ENST00000508659 NOGQ13253 232 aa20.76■□□□□ 0.91
CLDND1-219ENST00000508659 PRKG1Q13976 671 aa20.76■□□□□ 0.91
CLDND1-219ENST00000508659 MOB2Q70IA6 237 aa20.76■□□□□ 0.91
CLDND1-219ENST00000508659 ARMC9Q7Z3E5 817 aa20.76■□□□□ 0.91
CLDND1-219ENST00000508659 ZNF512BQ96KM6 892 aaPredicted RBP20.76■□□□□ 0.91
CLDND1-219ENST00000508659 AOC2O75106 756 aa20.75■□□□□ 0.91
CLDND1-219ENST00000508659 MAP2K1Q02750 393 aaPredicted RBP20.75■□□□□ 0.91
CLDND1-219ENST00000508659 CCDC102AQ96A19 550 aa20.75■□□□□ 0.91
CLDND1-219ENST00000508659 AIDAQ96BJ3 306 aa20.75■□□□□ 0.91
CLDND1-219ENST00000508659 TMEM39BQ9GZU3 492 aa20.75■□□□□ 0.91
CLDND1-219ENST00000508659 RAI14Q9P0K7 980 aa20.75■□□□□ 0.91
CLDND1-219ENST00000508659 GAKO14976 1311 aa20.75■□□□□ 0.91
CLDND1-219ENST00000508659 PPP1R12BO60237 982 aaPredicted RBP20.74■□□□□ 0.91
CLDND1-219ENST00000508659 SLC10A3P09131 477 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 MAP2K2P36507 400 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 MECOMQ03112 1051 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 NBPF12Q5TAG4 269 aaPredicted RBP20.74■□□□□ 0.91
CLDND1-219ENST00000508659 FKBP1CQ5VVH2 108 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 TBC1D9Q6ZT07 1266 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
CLDND1-219ENST00000508659 SNRKQ9NRH2 765 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms