RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 CARMIL3Q8ND23 1372 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 AP5Z1O43299 807 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 TOP1P11387 765 aaKnown RBP14.87□□□□□ -0.03
SMG7-214ENST00000508461 ATP6V1AP38606 617 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 HLFQ16534 295 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 PKNOX2Q96KN3 472 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 ZBTB1Q9Y2K1 713 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 PRDM1O75626 825 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 UBASH3AP57075 661 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 CCDC102BQ68D86 513 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 ZNF274Q96GC6 653 aaPredicted RBP14.87□□□□□ -0.03
SMG7-214ENST00000508461 GNL3LQ9NVN8 582 aaKnown RBP14.87□□□□□ -0.03
SMG7-214ENST00000508461 KCNJ14Q9UNX9 436 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 KRT40Q6A162 431 aa14.87□□□□□ -0.03
SMG7-214ENST00000508461 AFMP43652 599 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 SNW1Q13573 536 aaKnown RBP14.86□□□□□ -0.03
SMG7-214ENST00000508461 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
SMG7-214ENST00000508461 CCDC24Q8N4L8 307 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 GOLPH3LQ9H4A5 285 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 BRMS1Q9HCU9 246 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 PIK3C2AO00443 1686 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 URI1O94763 535 aaPredicted RBP14.86□□□□□ -0.03
SMG7-214ENST00000508461 CLIC6Q96NY7 704 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 WDR17Q8IZU2 1322 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 UQCRFS1P1P0C7P4 283 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 U2AF2P26368 475 aaKnown RBP eCLIP14.86□□□□□ -0.037e-17■■■■■ 49.3
SMG7-214ENST00000508461 RTN1Q16799 776 aa14.86□□□□□ -0.03
SMG7-214ENST00000508461 TERF1P54274 439 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 ZBTB38Q8NAP3 1195 aaPredicted RBP14.85□□□□□ -0.03
SMG7-214ENST00000508461 C1orf167Q5SNV9 1468 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 DPCR1Q3MIW9 517 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 WWC3Q9ULE0 1092 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 UTYO14607 1347 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 BRAPQ7Z569 592 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 FBXO18Q8NFZ0 1043 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 KCNF1Q9H3M0 494 aa14.85□□□□□ -0.03
SMG7-214ENST00000508461 CTSWP56202 376 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 PIGBQ92521 554 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 WASF1Q92558 559 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 RCOR1Q9UKL0 485 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 TPM1P09493 284 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 PFKFB1P16118 471 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 PDE6AP16499 860 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 PCMTD1Q96MG8 357 aaPredicted RBP14.84□□□□□ -0.03
SMG7-214ENST00000508461 XPO4Q9C0E2 1151 aaKnown RBP14.84□□□□□ -0.03
SMG7-214ENST00000508461 MCAMP43121 646 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 GSDMDP57764 484 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 ADALQ6DHV7 355 aa14.84□□□□□ -0.03
SMG7-214ENST00000508461 PCCAP05165 728 aaPredicted RBP14.83□□□□□ -0.03
SMG7-214ENST00000508461 STX17P56962 302 aa14.83□□□□□ -0.03
SMG7-214ENST00000508461 PIP4K2BP78356 416 aa14.83□□□□□ -0.03
SMG7-214ENST00000508461 PNOCQ13519 176 aa14.83□□□□□ -0.03
SMG7-214ENST00000508461 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.03
SMG7-214ENST00000508461 KIAA1468Q9P260 1216 aa14.83□□□□□ -0.03
SMG7-214ENST00000508461 SPATA31A3Q5VYP0 1347 aa14.83□□□□□ -0.03
SMG7-214ENST00000508461 KDM6AO15550 1401 aaPredicted RBP14.83□□□□□ -0.04
SMG7-214ENST00000508461 CBFA2T2O43439 604 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 SYT10Q6XYQ8 523 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 BRINP3Q76B58 766 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 DNAI1Q9UI46 699 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 DENND2AQ9ULE3 1009 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 MEGF6O75095 1541 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 NEMFO60524 1076 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 CCDC144BQ3MJ40 725 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 SEC31BQ9NQW1 1179 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 PDE8AO60658 829 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 BCAMP50895 628 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 USPL1Q5W0Q7 1092 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 ARHGAP23Q9P227 1491 aa14.83□□□□□ -0.04
SMG7-214ENST00000508461 PUM3Q15397 648 aaKnown RBP14.82□□□□□ -0.04
SMG7-214ENST00000508461 CAVIN4Q5BKX8 364 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 ZSWIM4Q9H7M6 989 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 CCDC196A0A1B0GTZ2 297 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 PRKAB2O43741 272 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 CTDNEP1O95476 244 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 CCDC152Q4G0S7 254 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 GIGYF2Q6Y7W6 1299 aaKnown RBP14.82□□□□□ -0.04
SMG7-214ENST00000508461 DIS3L2Q8IYB7 885 aaKnown RBP14.82□□□□□ -0.04
SMG7-214ENST00000508461 SPATA5Q8NB90 893 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 SDR42E1Q8WUS8 393 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 DHX58Q96C10 678 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 CABP5Q9NP86 173 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 GPR108Q9NPR9 543 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 ZNF827Q17R98 1081 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 IQCA1Q86XH1 822 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 SMARCE1Q969G3 411 aa14.82□□□□□ -0.04
SMG7-214ENST00000508461 UTP14AQ9BVJ6 771 aaKnown RBP14.82□□□□□ -0.04
SMG7-214ENST00000508461 PIH1D3Q9NQM4 214 aaKnown RBP14.82□□□□□ -0.04
SMG7-214ENST00000508461 SLIT1O75093 1534 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 NAA30Q147X3 362 aaPredicted RBP14.81□□□□□ -0.04
SMG7-214ENST00000508461 TSGA10IPQ3SY00 556 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.81□□□□□ -0.04
SMG7-214ENST00000508461 LRRC8AQ8IWT6 810 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 LINC00301Q8NCQ3 95 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 PAXBP1Q9Y5B6 917 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 BTBD18B2RXH4 712 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 PDE8BO95263 885 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 KCNQ4P56696 695 aa14.81□□□□□ -0.04
SMG7-214ENST00000508461 GOLGA8FQ08AF8 430 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms