RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 LDHBP07195 334 aaKnown RBP23.73■■□□□ 1.39
LMNA-221ENST00000506981 RHPN1Q8TCX5 695 aa23.73■■□□□ 1.39
LMNA-221ENST00000506981 DBNDD2Q9BQY9 259 aa23.73■■□□□ 1.39
LMNA-221ENST00000506981 ARID4AP29374 1257 aaPredicted RBP23.72■■□□□ 1.39
LMNA-221ENST00000506981 GRIK5Q16478 980 aa23.72■■□□□ 1.39
LMNA-221ENST00000506981 MAST2Q6P0Q8 1798 aa23.72■■□□□ 1.39
LMNA-221ENST00000506981 MYO5AQ9Y4I1 1855 aaKnown RBP23.72■■□□□ 1.39
LMNA-221ENST00000506981 SPTY2D1Q68D10 685 aaPredicted RBP23.71■■□□□ 1.39
LMNA-221ENST00000506981 AACSQ86V21 672 aa23.71■■□□□ 1.39
LMNA-221ENST00000506981 CLASRPQ8N2M8 674 aaKnown RBP23.71■■□□□ 1.39
LMNA-221ENST00000506981 CDCA5Q96FF9 252 aa23.71■■□□□ 1.39
LMNA-221ENST00000506981 PRMT6Q96LA8 375 aaPredicted RBP23.71■■□□□ 1.39
LMNA-221ENST00000506981 CCDC8Q9H0W5 538 aaPredicted RBP23.71■■□□□ 1.39
LMNA-221ENST00000506981 VEZTQ9HBM0 779 aa23.71■■□□□ 1.39
LMNA-221ENST00000506981 ABCF2Q9UG63 623 aa23.71■■□□□ 1.39
LMNA-221ENST00000506981 PCDHAC2Q9Y5I4 1007 aa23.71■■□□□ 1.39
LMNA-221ENST00000506981 AK9Q5TCS8 1911 aa23.71■■□□□ 1.39
LMNA-221ENST00000506981 CLRN2A0PK11 232 aa23.7■■□□□ 1.38
LMNA-221ENST00000506981 CST9Q5W186 159 aa23.7■■□□□ 1.38
LMNA-221ENST00000506981 SPATA5Q8NB90 893 aa23.7■■□□□ 1.38
LMNA-221ENST00000506981 EAF2Q96CJ1 260 aaPredicted RBP23.7■■□□□ 1.38
LMNA-221ENST00000506981 KLRG1Q96E93 195 aa23.7■■□□□ 1.38
LMNA-221ENST00000506981 IL1RAPL2Q9NP60 686 aa23.7■■□□□ 1.38
LMNA-221ENST00000506981 PAPPA2Q9BXP8 1791 aa23.7■■□□□ 1.38
LMNA-221ENST00000506981 PRDX5P30044 214 aa23.69■■□□□ 1.38
LMNA-221ENST00000506981 DZIP1Q86YF9 867 aaKnown RBP23.69■■□□□ 1.38
LMNA-221ENST00000506981 MRIQ9BWK5 157 aa23.69■■□□□ 1.38
LMNA-221ENST00000506981 HMG20BQ9P0W2 317 aa23.69■■□□□ 1.38
LMNA-221ENST00000506981 MKRN1Q9UHC7 482 aaKnown RBP23.69■■□□□ 1.38
LMNA-221ENST00000506981 DBNLQ9UJU6 430 aaKnown RBP23.69■■□□□ 1.38
LMNA-221ENST00000506981 SCAF8Q9UPN6 1271 aaKnown RBP23.69■■□□□ 1.38
LMNA-221ENST00000506981 CNTNAP1P78357 1384 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 NF2P35240 595 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 HHIPL2Q6UWX4 724 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 DLK2Q6UY11 383 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 C2orf69Q8N8R5 385 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 TMOD2Q9NZR1 351 aa23.68■■□□□ 1.38
LMNA-221ENST00000506981 SUPT16HQ9Y5B9 1047 aaKnown RBP23.68■■□□□ 1.38
LMNA-221ENST00000506981 MCAMP43121 646 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 TNFAIP1Q13829 316 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 SPDYE2Q495Y8 402 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 PAXIP1Q6ZW49 1069 aaPredicted RBP23.67■■□□□ 1.38
LMNA-221ENST00000506981 ERICH6Q7L0X2 663 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 SLF2Q8IX21 1173 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 DNAJC5GQ8N7S2 189 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 ZDHHC15Q96MV8 337 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 TDRD3Q9H7E2 651 aaKnown RBP23.67■■□□□ 1.38
LMNA-221ENST00000506981 GBA2Q9HCG7 927 aaPredicted RBP23.67■■□□□ 1.38
LMNA-221ENST00000506981 TLR7Q9NYK1 1049 aaKnown RBP23.67■■□□□ 1.38
LMNA-221ENST00000506981 PPP2R3BQ9Y5P8 575 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 TLL2Q9Y6L7 1015 aa23.67■■□□□ 1.38
LMNA-221ENST00000506981 IFIT2P09913 472 aaKnown RBP23.66■■□□□ 1.38
LMNA-221ENST00000506981 AAMPQ13685 434 aa23.66■■□□□ 1.38
LMNA-221ENST00000506981 DEFB115Q30KQ5 88 aa23.66■■□□□ 1.38
LMNA-221ENST00000506981 ZNF512BQ96KM6 892 aaPredicted RBP23.66■■□□□ 1.38
LMNA-221ENST00000506981 LRRCC1Q9C099 1032 aa23.66■■□□□ 1.38
LMNA-221ENST00000506981 ZNF70Q9UC06 446 aaPredicted RBP23.66■■□□□ 1.38
LMNA-221ENST00000506981 RASSF10A6NK89 507 aa23.65■■□□□ 1.38
LMNA-221ENST00000506981 TNNI2P48788 182 aa23.65■■□□□ 1.38
LMNA-221ENST00000506981 PI16Q6UXB8 463 aa23.65■■□□□ 1.38
LMNA-221ENST00000506981 DOCK2Q92608 1830 aa23.65■■□□□ 1.38
LMNA-221ENST00000506981 DIXDC1Q155Q3 683 aa23.64■■□□□ 1.37
LMNA-221ENST00000506981 DEFB129Q9H1M3 183 aa23.64■■□□□ 1.37
LMNA-221ENST00000506981 SNRKQ9NRH2 765 aa23.64■■□□□ 1.37
LMNA-221ENST00000506981 PCDHB15Q9Y5E8 787 aa23.64■■□□□ 1.37
LMNA-221ENST00000506981 AOX1Q06278 1338 aa23.63■■□□□ 1.37
LMNA-221ENST00000506981 TTLL12Q14166 644 aaPredicted RBP23.63■■□□□ 1.37
LMNA-221ENST00000506981 PRAMEF18Q5VWM3 479 aa23.63■■□□□ 1.37
LMNA-221ENST00000506981 SAPCD2Q86UD0 394 aa23.63■■□□□ 1.37
LMNA-221ENST00000506981 RAI14Q9P0K7 980 aa23.63■■□□□ 1.37
LMNA-221ENST00000506981 LRP2BPQ9P2M1 347 aa23.63■■□□□ 1.37
LMNA-221ENST00000506981 DAGLAQ9Y4D2 1042 aa23.63■■□□□ 1.37
LMNA-221ENST00000506981 ECE1P42892 770 aa23.62■■□□□ 1.37
LMNA-221ENST00000506981 HUNKP57058 714 aa23.62■■□□□ 1.37
LMNA-221ENST00000506981 FKBP1BP68106 108 aa23.62■■□□□ 1.37
LMNA-221ENST00000506981 GSTO1P78417 241 aa23.62■■□□□ 1.37
LMNA-221ENST00000506981 DCTPP1Q9H773 170 aa23.62■■□□□ 1.37
LMNA-221ENST00000506981 CEP350Q5VT06 3117 aa23.62■■□□□ 1.37
LMNA-221ENST00000506981 MYH7P12883 1935 aa23.61■■□□□ 1.37
LMNA-221ENST00000506981 TCP10L2B9ZVM9 353 aa23.61■■□□□ 1.37
LMNA-221ENST00000506981 APOBEC3HQ6NTF7 200 aaKnown RBP23.61■■□□□ 1.37
LMNA-221ENST00000506981 TBC1D9Q6ZT07 1266 aa23.61■■□□□ 1.37
LMNA-221ENST00000506981 LDHCP07864 332 aa23.6■■□□□ 1.37
LMNA-221ENST00000506981 GRM1Q13255 1194 aa23.6■■□□□ 1.37
LMNA-221ENST00000506981 RASA3Q14644 834 aa23.6■■□□□ 1.37
LMNA-221ENST00000506981 HHIPL1Q96JK4 782 aa23.6■■□□□ 1.37
LMNA-221ENST00000506981 ZAP70P43403 619 aa23.59■■□□□ 1.37
LMNA-221ENST00000506981 VEGFBP49765 207 aa23.59■■□□□ 1.37
LMNA-221ENST00000506981 MECOMQ03112 1051 aa23.59■■□□□ 1.37
LMNA-221ENST00000506981 SUPT20HL1Q3ZLR7 823 aa23.59■■□□□ 1.37
LMNA-221ENST00000506981 MROH7-TTC4A0A0A0MT08 1334 aa23.59■■□□□ 1.37
LMNA-221ENST00000506981 GAKO14976 1311 aa23.59■■□□□ 1.37
LMNA-221ENST00000506981 ARMC9Q7Z3E5 817 aa23.58■■□□□ 1.37
LMNA-221ENST00000506981 CAPNS2Q96L46 248 aa23.58■■□□□ 1.37
LMNA-221ENST00000506981 ZBTB47Q9UFB7 747 aaPredicted RBP23.58■■□□□ 1.37
LMNA-221ENST00000506981 THSD7BQ9C0I4 1608 aa23.58■■□□□ 1.36
LMNA-221ENST00000506981 WDR33Q9C0J8 1336 aaKnown RBP23.58■■□□□ 1.36
LMNA-221ENST00000506981 SMARCA5O60264 1052 aaPredicted RBP23.57■■□□□ 1.36
LMNA-221ENST00000506981 IGSF3O75054 1194 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms