RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 SEMA3EO15041 775 aa19.26■□□□□ 0.67
CLDND1-211ENST00000506575 CTCFP49711 727 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-211ENST00000506575 TIMM10P62072 90 aa19.26■□□□□ 0.67
CLDND1-211ENST00000506575 ATP8B2P98198 1209 aa19.26■□□□□ 0.67
CLDND1-211ENST00000506575 HDLBPQ00341 1268 aaKnown RBP19.26■□□□□ 0.67
CLDND1-211ENST00000506575 OS9Q13438 667 aaPredicted RBP19.26■□□□□ 0.67
CLDND1-211ENST00000506575 TNFAIP1Q13829 316 aa19.26■□□□□ 0.67
CLDND1-211ENST00000506575 GRIK5Q16478 980 aa19.26■□□□□ 0.67
CLDND1-211ENST00000506575 DENND2AQ9ULE3 1009 aa19.26■□□□□ 0.67
CLDND1-211ENST00000506575 ADORA1P30542 326 aa19.25■□□□□ 0.67
CLDND1-211ENST00000506575 PHKA1P46020 1223 aa19.25■□□□□ 0.67
CLDND1-211ENST00000506575 MVPQ14764 893 aaKnown RBP19.25■□□□□ 0.67
CLDND1-211ENST00000506575 CCDC102BQ68D86 513 aa19.25■□□□□ 0.67
CLDND1-211ENST00000506575 NEUROD6Q96NK8 337 aa19.25■□□□□ 0.67
CLDND1-211ENST00000506575 TDRD3Q9H7E2 651 aaKnown RBP19.25■□□□□ 0.67
CLDND1-211ENST00000506575 ZNF70Q9UC06 446 aaPredicted RBP19.25■□□□□ 0.67
CLDND1-211ENST00000506575 UBE2Q2LH0YL09 131 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 PRKG1Q13976 671 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 POLA2Q14181 598 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 SPDYE2Q495Y8 402 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 GORABQ5T7V8 394 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 MOB2Q70IA6 237 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 ARMC9Q7Z3E5 817 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 SSH3Q8TE77 659 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 XAGE2Q96GT9 111 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 AOX1Q06278 1338 aa19.24■□□□□ 0.67
CLDND1-211ENST00000506575 FAM155AB1AL88 458 aaPredicted RBP19.23■□□□□ 0.67
CLDND1-211ENST00000506575 SUPT20HL1Q3ZLR7 823 aa19.23■□□□□ 0.67
CLDND1-211ENST00000506575 COL13A1Q5TAT6 717 aaPredicted RBP19.23■□□□□ 0.67
CLDND1-211ENST00000506575 MRIQ9BWK5 157 aa19.23■□□□□ 0.67
CLDND1-211ENST00000506575 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
CLDND1-211ENST00000506575 LDHBP07195 334 aaKnown RBP19.22■□□□□ 0.67
CLDND1-211ENST00000506575 SLC10A3P09131 477 aa19.22■□□□□ 0.67
CLDND1-211ENST00000506575 TNNI2P48788 182 aa19.22■□□□□ 0.67
CLDND1-211ENST00000506575 RASA3Q14644 834 aa19.22■□□□□ 0.67
CLDND1-211ENST00000506575 ZDHHC15Q96MV8 337 aa19.22■□□□□ 0.67
CLDND1-211ENST00000506575 TMOD2Q9NZR1 351 aa19.22■□□□□ 0.67
CLDND1-211ENST00000506575 PPP1R12BO60237 982 aaPredicted RBP19.21■□□□□ 0.67
CLDND1-211ENST00000506575 HHIPL2Q6UWX4 724 aa19.21■□□□□ 0.67
CLDND1-211ENST00000506575 ZGPATQ8N5A5 531 aaKnown RBP19.21■□□□□ 0.67
CLDND1-211ENST00000506575 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.21■□□□□ 0.67
CLDND1-211ENST00000506575 DDX19BQ9UMR2 479 aa19.21■□□□□ 0.67
CLDND1-211ENST00000506575 ANGEL1Q9UNK9 670 aaKnown RBP19.21■□□□□ 0.67
CLDND1-211ENST00000506575 SALL1Q9NSC2 1324 aa19.21■□□□□ 0.67
CLDND1-211ENST00000506575 TCP10L2B9ZVM9 353 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 ZBTB22O15209 634 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 CA12O43570 354 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 PRDX5P30044 214 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 LBX1P52954 281 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 KIF23Q02241 960 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-211ENST00000506575 RASGRF1Q13972 1273 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 RASAL3Q86YV0 1011 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 ZIC5Q96T25 663 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 CHMP4BQ9H444 224 aaKnown RBP19.2■□□□□ 0.66
CLDND1-211ENST00000506575 PRDM10Q9NQV6 1147 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 COG6Q9Y2V7 657 aa19.2■□□□□ 0.66
CLDND1-211ENST00000506575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.2■□□□□ 0.66
CLDND1-211ENST00000506575 HSPA8P11142 646 aaKnown RBP19.19■□□□□ 0.66
CLDND1-211ENST00000506575 NBPF12Q5TAG4 269 aaPredicted RBP19.19■□□□□ 0.66
CLDND1-211ENST00000506575 CEP85Q6P2H3 762 aa19.19■□□□□ 0.66
CLDND1-211ENST00000506575 GPR108Q9NPR9 543 aa19.19■□□□□ 0.66
CLDND1-211ENST00000506575 PDS5AQ29RF7 1337 aaKnown RBP19.19■□□□□ 0.66
CLDND1-211ENST00000506575 SPTY2D1Q68D10 685 aaPredicted RBP19.18■□□□□ 0.66
CLDND1-211ENST00000506575 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
CLDND1-211ENST00000506575 NOP58Q9Y2X3 529 aaKnown RBP19.18■□□□□ 0.66
CLDND1-211ENST00000506575 SSC5DA1L4H1 1573 aa19.18■□□□□ 0.66
CLDND1-211ENST00000506575 AKAP11Q9UKA4 1901 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 IREB2P48200 963 aaKnown RBP19.17■□□□□ 0.66
CLDND1-211ENST00000506575 CACNB3P54284 484 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 DIXDC1Q155Q3 683 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 TNNI3KQ59H18 835 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
CLDND1-211ENST00000506575 DZIP1Q86YF9 867 aaKnown RBP19.17■□□□□ 0.66
CLDND1-211ENST00000506575 REM2Q8IYK8 340 aaPredicted RBP19.17■□□□□ 0.66
CLDND1-211ENST00000506575 TNS4Q8IZW8 715 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 TMEM39BQ9GZU3 492 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 FZD1Q9UP38 647 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 FPGT-TNNI3KV9GXZ4 949 aa19.17■□□□□ 0.66
CLDND1-211ENST00000506575 MYH2Q9UKX2 1941 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 UQCRFS1P1P0C7P4 283 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 MAP3K11Q16584 847 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 LDLRAD1Q5T700 205 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 SLF2Q8IX21 1173 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.16■□□□□ 0.66
CLDND1-211ENST00000506575 TSKSQ9UJT2 592 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 DAGLAQ9Y4D2 1042 aa19.16■□□□□ 0.66
CLDND1-211ENST00000506575 ARID4AP29374 1257 aaPredicted RBP19.15■□□□□ 0.66
CLDND1-211ENST00000506575 PDE3AQ14432 1141 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 FKBP1CQ5VVH2 108 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 SPATA5Q8NB90 893 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 SLC10A4Q96EP9 437 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 HMG20BQ9P0W2 317 aa19.15■□□□□ 0.66
CLDND1-211ENST00000506575 UNCXA6NJT0 531 aa19.14■□□□□ 0.65
CLDND1-211ENST00000506575 HMMRO75330 724 aa19.14■□□□□ 0.65
CLDND1-211ENST00000506575 HSP90AB4PQ58FF6 505 aa19.14■□□□□ 0.65
CLDND1-211ENST00000506575 IFFO2Q5TF58 517 aa19.14■□□□□ 0.65
CLDND1-211ENST00000506575 ERICH6Q7L0X2 663 aa19.14■□□□□ 0.65
CLDND1-211ENST00000506575 FAM83AQ86UY5 434 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms