RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ECEL1O95672 775 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ZNF157P51786 506 aaPredicted RBP6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 PTPN12Q05209 780 aaKnown RBP6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 FAAP100Q0VG06 881 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 UVSSAQ2YD98 709 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ZMYM1Q5SVZ6 1142 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 SND1Q7KZF4 910 aaKnown RBP eCLIP6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 TMPRSS13Q9BYE2 586 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 KRTAP4-6Q9BYQ5 205 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 WWC3Q9ULE0 1092 aa6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ZCCHC6Q5VYS8 1495 aaKnown RBP6.64□□□□□ -1.35
PDLIM1P4-201ENST00000504327 MEGF11A6BM72 1044 aa6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 DHX15O43143 795 aaKnown RBP6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 SART1O43290 800 aaKnown RBP6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 P4HBP07237 508 aaKnown RBP6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 MAOBP27338 520 aa6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 NXPE4Q6UWF7 544 aa6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 DTHD1Q6ZMT9 781 aa6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 MYRFLQ96LU7 910 aa6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 RAXQ9Y2V3 346 aa6.63□□□□□ -1.35
PDLIM1P4-201ENST00000504327 NACADO15069 1562 aa6.62□□□□□ -1.35
PDLIM1P4-201ENST00000504327 FSTP19883 344 aa6.62□□□□□ -1.35
PDLIM1P4-201ENST00000504327 POU4F3Q15319 338 aa6.62□□□□□ -1.35
PDLIM1P4-201ENST00000504327 NUTM2GQ5VZR2 741 aa6.62□□□□□ -1.35
PDLIM1P4-201ENST00000504327 RB1CC1Q8TDY2 1594 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 GAS2O43903 313 aaKnown RBP6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 TIAF1O95411 115 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 CYP11A1P05108 521 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 BMP3P12645 472 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 DRD2P14416 443 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 FAM20CQ8IXL6 584 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 C12orf50Q8NA57 414 aaPredicted RBP6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 SMG8Q8ND04 991 aaKnown RBP6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 CORO1BQ9BR76 489 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 CYP4F12Q9HCS2 524 aa6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 GPN3Q9UHW5 284 aaPredicted RBP6.61□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ATP2B2Q01814 1243 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 RPS26P11Q5JNZ5 115 aaPredicted RBP6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 EXOSC6Q5RKV6 272 aaKnown RBP6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ALG1LQ6GMV1 187 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 DDX54Q8TDD1 881 aaKnown RBP6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 OSBPL7Q9BZF2 842 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 KCNF1Q9H3M0 494 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 SUGCTQ9HAC7 445 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 STOML1Q9UBI4 398 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 MYO15BQ96JP2 1530 aa6.6□□□□□ -1.35
PDLIM1P4-201ENST00000504327 HMX2A2RU54 273 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 EIF4EBP3O60516 100 aaPredicted RBP6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ADH5P11766 374 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 AP3B2Q13367 1082 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 SGO2Q562F6 1265 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 TRIM42Q8IWZ5 723 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 C3orf58Q8NDZ4 430 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 ZC3H12CQ9C0D7 883 aaKnown RBP6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 PPP4R2Q9NY27 417 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 AKAP2Q9Y2D5 859 aa6.59□□□□□ -1.35
PDLIM1P4-201ENST00000504327 SCO2A0A1W2PP80 73 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 ANKRD33BA6NCL7 494 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 IGSF3O75054 1194 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 LDHBP07195 334 aaKnown RBP6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 XRCC5P13010 732 aaKnown RBP6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 SOX4Q06945 474 aaPredicted RBP6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 PDE3AQ14432 1141 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 AKAP4Q5JQC9 854 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 TMCO4Q5TGY1 634 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 BEND4Q6ZU67 534 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 Q8N3U1 123 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 C2CD4AQ8NCU7 369 aaPredicted RBP6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 HIF3AQ9Y2N7 669 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 DCAF1Q9Y4B6 1507 aa6.58□□□□□ -1.36
PDLIM1P4-201ENST00000504327 IGLV1-40P01703 118 aa6.57□□□□□ -1.36
PDLIM1P4-201ENST00000504327 HSP90B1P14625 803 aaKnown RBP6.57□□□□□ -1.36
PDLIM1P4-201ENST00000504327 MAP4P27816 1152 aaKnown RBP6.57□□□□□ -1.36
PDLIM1P4-201ENST00000504327 RXRBP28702 533 aa6.57□□□□□ -1.36
PDLIM1P4-201ENST00000504327 WDR18Q9BV38 432 aa6.57□□□□□ -1.36
PDLIM1P4-201ENST00000504327 AP4E1Q9UPM8 1137 aa6.57□□□□□ -1.36
PDLIM1P4-201ENST00000504327 EIF5BO60841 1220 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 FBXO24O75426 580 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 CDK11BP21127 795 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 GSTT1P30711 240 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 NFIAQ12857 509 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 HP1BP3Q5SSJ5 553 aaPredicted RBP6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 TPTE2Q6XPS3 522 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 CLEC10AQ8IUN9 316 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 STK35Q8TDR2 534 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 FAM83CQ9BQN1 747 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 CCDC86Q9H6F5 360 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 ZFYVE1Q9HBF4 777 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 RAD18Q9NS91 495 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 RNF19AQ9NV58 838 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 TMEM39AQ9NV64 488 aa6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 CDK11AQ9UQ88 783 aaPredicted RBP6.56□□□□□ -1.36
PDLIM1P4-201ENST00000504327 SPG7Q9UQ90 795 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms