RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ELP1O95163 1332 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 SBNO1A3KN83 1393 aa18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 NAP1L4Q99733 375 aaKnown RBP18.71■□□□□ 0.59
PCDHA1-203ENST00000504120 NEK11Q8NG66 645 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 METTL22Q9BUU2 404 aaPredicted RBP18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 IFNKQ9P0W0 207 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 DENND2AQ9ULE3 1009 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 G2E3Q7L622 706 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 OPA1O60313 960 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 FAM160A1Q05DH4 1040 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 HS2ST1Q7LGA3 356 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 TMEM87BQ96K49 555 aa18.7■□□□□ 0.58
PCDHA1-203ENST00000504120 LLPHQ9BRT6 129 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 IMPG2Q9BZV3 1241 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 NSFL1CQ9UNZ2 370 aaKnown RBP18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 FAM13AO94988 1023 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 MBD4O95243 580 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 TNNI3KQ59H18 835 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 FPGT-TNNI3KV9GXZ4 949 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 RILPL1Q5EBL4 403 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 ZNF790Q6PG37 636 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 MYL5Q02045 173 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 TSNARE1Q96NA8 513 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 CCDC77Q9BR77 488 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 MRVI1Q9Y6F6 885 aa18.69■□□□□ 0.58
PCDHA1-203ENST00000504120 PPP1R2P41236 205 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 STX17P56962 302 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 CHL1O00533 1208 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 ZFYVE16Q7Z3T8 1539 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 A0A1B0GUL7 405 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 LUC7L2Q9Y383 392 aaKnown RBP18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 SLC27A2O14975 620 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 EYA3Q99504 573 aa18.68■□□□□ 0.58
PCDHA1-203ENST00000504120 B4DLN1 442 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 MRPL12P52815 198 aaKnown RBP18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 MCM6Q14566 821 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 TTC6Q86TZ1 520 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 KCNA6P17658 529 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 RXRAP19793 462 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 A0A1W2PRG0 241 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 PARP10Q53GL7 1025 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 STMN4Q9H169 189 aaPredicted RBP18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 TUBBP07437 444 aa18.67■□□□□ 0.58
PCDHA1-203ENST00000504120 PARP1P09874 1014 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 NSRP1Q9H0G5 558 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 ZMYM4Q5VZL5 1548 aa18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 DEXIO95424 95 aa18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 FMNL3Q8IVF7 1028 aa18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 SAMD9LQ8IVG5 1584 aa18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 ARID5AQ03989 594 aa18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 PUM3Q15397 648 aaKnown RBP18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 C6orf163Q5TEZ5 329 aa18.66■□□□□ 0.58
PCDHA1-203ENST00000504120 IVLP07476 585 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 PPP1R14CQ8TAE6 165 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 PLCD1P51178 756 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 GUCA1BQ9UMX6 200 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 NCKAP5LQ9HCH0 1330 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 PLXNC1O60486 1568 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 COMMD10Q9Y6G5 202 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 A0A1B0GVL5 298 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 CPA1P15085 419 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 TIMM10P62072 90 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 APPBP2Q92624 585 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 SNX14Q9Y5W7 946 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 ITGA6P23229 1130 aa18.65■□□□□ 0.58
PCDHA1-203ENST00000504120 RPL13P26373 211 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 C8orf37Q96NL8 207 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 TRIM35Q9UPQ4 493 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 ATP2A1O14983 1001 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 SGSM2O43147 1006 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 ZNF569Q5MCW4 686 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 OTUD7AQ8TE49 926 aaPredicted RBP18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 FAM89AQ96GI7 184 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 TCHPQ9BT92 498 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 SV2BQ7L1I2 683 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 SREK1Q8WXA9 508 aaKnown RBP18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 LZTFL1Q9NQ48 299 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 LRRC45Q96CN5 670 aa18.64■□□□□ 0.57
PCDHA1-203ENST00000504120 SH3TC1Q8TE82 1336 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 KDM5DQ9BY66 1539 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 PTPRTO14522 1441 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 VWA3AA6NCI4 1184 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 KARSQ15046 597 aaKnown RBP18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 DBNDD2Q9BQY9 259 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 ZKSCAN3Q9BRR0 538 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 TSGA10Q9BZW7 698 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 IQCGQ9H095 443 aaKnown RBP18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 B4E1Z4 1266 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 ANO1Q5XXA6 986 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 AKR1B15C9JRZ8 316 aaPredicted RBP18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 CCDC65Q8IXS2 484 aa18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.63■□□□□ 0.57
PCDHA1-203ENST00000504120 PAXIP1Q6ZW49 1069 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms