RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 ILDR2Q71H61 639 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 MAGEB6Q8N7X4 407 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 DDRGK1Q96HY6 314 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 JAG2Q9Y219 1238 aa8.3□□□□□ -1.08
TOPBP1-203ENST00000503464 SALL1Q9NSC2 1324 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 ECM29Q5VYK3 1845 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 SLC27A2O14975 620 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 GPAA1O43292 621 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 HSPD1P10809 573 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 PRDX5P30044 214 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 CHAF1AQ13111 956 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 RABEP1Q15276 862 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 CREB3L3Q68CJ9 461 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 KIAA1211Q6ZU35 1233 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 VPS37DQ86XT2 251 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 MPNDQ8N594 471 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 CNKSR1Q969H4 720 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 SNX21Q969T3 373 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 DSCC1Q9BVC3 393 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 RTFDC1Q9BY42 306 aaPredicted RBP8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 CD209Q9NNX6 404 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 GNL3LQ9NVN8 582 aaKnown RBP8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 NAV1Q8NEY1 1877 aa8.29□□□□□ -1.08
TOPBP1-203ENST00000503464 C6orf229H3BNL8 230 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 MCCP23508 829 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 CLCN6P51797 869 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 MAP3K12Q12852 859 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 WASHC4Q2M389 1173 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 TTLL5Q6EMB2 1281 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 ZSCAN25Q6NSZ9 544 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 POTEGQ6S5H5 508 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 DPP8Q6V1X1 898 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 STOX1Q6ZVD7 989 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 ZNF804AQ7Z570 1209 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 LCORLQ8N3X6 602 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 SPDYE1Q8NFV5 336 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 NSUN4Q96CB9 384 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 TTC14Q96N46 770 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 STRBPQ96SI9 672 aaKnown RBP8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 EPB41L4AQ9HCS5 686 aaPredicted RBP8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 ABCF2Q9UG63 623 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 CLEC11AQ9Y240 323 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 FAM205AQ6ZU69 1335 aa8.28□□□□□ -1.08
TOPBP1-203ENST00000503464 RIMBP2O15034 1052 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 PRKAB2O43741 272 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 C21orf2O43822 256 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 MBD4O95243 580 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 CYP21A2P08686 494 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 CPA1P15085 419 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 MECOMQ03112 1051 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 LRRFIP1Q32MZ4 808 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 TSGA10IPQ3SY00 556 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 CERS5Q8N5B7 392 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 MIGA1Q8NAN2 632 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 RIOK1Q9BRS2 568 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 UPF3BQ9BZI7 483 aaKnown RBP8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 NBPF3Q9H094 633 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 ARMT1Q9H993 441 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 RAI14Q9P0K7 980 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 LRP2BPQ9P2M1 347 aa8.27□□□□□ -1.09
TOPBP1-203ENST00000503464 GSG1L2A8MUP6 293 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 FGAP02671 866 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 ATXN8OSP0DMR3 200 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 CYP7A1P22680 504 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 POLD1P28340 1107 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 TGFB2P61812 414 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 DYNLL1P63167 89 aaKnown RBP8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 DOK7Q18PE1 504 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 TTLL6Q8N841 843 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 NKX2-3Q8TAU0 364 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 WDR66Q8TBY9 1149 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 COA1Q9GZY4 146 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 ZSWIM6Q9HCJ5 1215 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 KCNQ5Q9NR82 932 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 TACC3Q9Y6A5 838 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 ZMYM6O95789 1325 aa8.26□□□□□ -1.09
TOPBP1-203ENST00000503464 SMIM22K7EJ46 135 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 SOCS7O14512 581 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 FRAT2O75474 233 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 NEK4P51957 841 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 DIXDC1Q155Q3 683 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 NAA16Q6N069 864 aaPredicted RBP8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 ERICH6Q7L0X2 663 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 AIDAQ96BJ3 306 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 JAKMIP1Q96N16 626 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 MXD3Q9BW11 206 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 TM6SF1Q9BZW5 370 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 ZC3H12CQ9C0D7 883 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 DBNDD1Q9H9R9 158 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 MYH1P12882 1939 aa8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 GOLGB1Q14789 3259 aaKnown RBP8.25□□□□□ -1.09
TOPBP1-203ENST00000503464 MAGEB6P1A0A0J9YX57 407 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 YDJCA8MPS7 323 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 K7ELQ4 463 aaPredicted RBP8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 LDHBP07195 334 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 CASTP20810 708 aaKnown RBP8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 DDIT3P35638 169 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 GTF2IP78347 998 aa8.24□□□□□ -1.09
TOPBP1-203ENST00000503464 KIAA2012Q0VF49 1180 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms