RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF646O15015 1829 aaPredicted RBP24.64■■□□□ 1.53
CDC42SE2-206ENST00000503291 TNIP1Q15025 636 aa24.64■■□□□ 1.53
CDC42SE2-206ENST00000503291 RSBN1LQ6PCB5 846 aaPredicted RBP24.64■■□□□ 1.53
CDC42SE2-206ENST00000503291 DZIP1Q86YF9 867 aaKnown RBP24.64■■□□□ 1.53
CDC42SE2-206ENST00000503291 CWC27Q6UX04 472 aaKnown RBP24.63■■□□□ 1.53
CDC42SE2-206ENST00000503291 F8W031 263 aaPredicted RBP24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 IGSF3O75054 1194 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 UBE3CQ15386 1083 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 FAM227BQ96M60 508 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 ZBTB12Q9Y330 459 aaPredicted RBP24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 ZNF532Q9HCE3 1301 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 TCRBV5S4A2TA0A5A2 114 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 NMIQ13287 307 aaPredicted RBP24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 NAA16Q6N069 864 aaPredicted RBP24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 CASC1Q6TDU7 716 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 KIAA0825Q8IV33 1275 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 TTF2Q9UNY4 1162 aaKnown RBP24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 MYH7P12883 1935 aa24.62■■□□□ 1.53
CDC42SE2-206ENST00000503291 DCAF8L1A6NGE4 600 aa24.61■■□□□ 1.53
CDC42SE2-206ENST00000503291 C8orf34Q49A92 452 aa24.61■■□□□ 1.53
CDC42SE2-206ENST00000503291 MYO3BQ8WXR4 1341 aa24.61■■□□□ 1.53
CDC42SE2-206ENST00000503291 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
CDC42SE2-206ENST00000503291 CYP7A1P22680 504 aa24.61■■□□□ 1.53
CDC42SE2-206ENST00000503291 ZMYM1Q5SVZ6 1142 aa24.6■■□□□ 1.53
CDC42SE2-206ENST00000503291 APPBP2Q92624 585 aa24.6■■□□□ 1.53
CDC42SE2-206ENST00000503291 GMLQ99445 158 aa24.6■■□□□ 1.53
CDC42SE2-206ENST00000503291 GJA3Q9Y6H8 435 aa24.6■■□□□ 1.53
CDC42SE2-206ENST00000503291 A0A0D9SFI3 127 aa24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 DIXDC1Q155Q3 683 aa24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 AGBL3Q8NEM8 1001 aa24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 OSBP2Q969R2 916 aa24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 SEC62Q99442 399 aaKnown RBP24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 GSTO1P78417 241 aa24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 TMED8Q6PL24 325 aaPredicted RBP24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 ADGRA1Q86SQ6 560 aa24.59■■□□□ 1.53
CDC42SE2-206ENST00000503291 SCNN1DP51172 638 aa24.58■■□□□ 1.53
CDC42SE2-206ENST00000503291 RUFY2Q8WXA3 655 aa24.58■■□□□ 1.53
CDC42SE2-206ENST00000503291 PUS7LQ9H0K6 701 aaKnown RBP24.58■■□□□ 1.53
CDC42SE2-206ENST00000503291 HELLSQ9NRZ9 838 aa24.58■■□□□ 1.53
CDC42SE2-206ENST00000503291 IL25Q9H293 177 aa24.57■■□□□ 1.52
CDC42SE2-206ENST00000503291 MCMDC2Q4G0Z9 681 aa24.57■■□□□ 1.52
CDC42SE2-206ENST00000503291 ESYT1Q9BSJ8 1104 aa24.57■■□□□ 1.52
CDC42SE2-206ENST00000503291 MAST3O60307 1309 aa24.57■■□□□ 1.52
CDC42SE2-206ENST00000503291 TIAM2Q8IVF5 1701 aa24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 LDHCP07864 332 aa24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 SLF2Q8IX21 1173 aa24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 GPC2Q8N158 579 aa24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 MIGA1Q8NAN2 632 aa24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 FAM163AQ96GL9 167 aaPredicted RBP24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 MRIQ9BWK5 157 aa24.56■■□□□ 1.52
CDC42SE2-206ENST00000503291 M0R2C6 588 aa24.55■■□□□ 1.52
CDC42SE2-206ENST00000503291 SGSM2O43147 1006 aa24.55■■□□□ 1.52
CDC42SE2-206ENST00000503291 RPS12P25398 132 aaKnown RBP24.55■■□□□ 1.52
CDC42SE2-206ENST00000503291 OGFOD1Q8N543 542 aa24.55■■□□□ 1.52
CDC42SE2-206ENST00000503291 MAST2Q6P0Q8 1798 aa24.55■■□□□ 1.52
CDC42SE2-206ENST00000503291 USP17L8P0C7I0 530 aa24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 GMPSP49915 693 aaPredicted RBP24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 HDLBPQ00341 1268 aaKnown RBP24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 MYH2Q9UKX2 1941 aa24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 MROH7-TTC4A0A0A0MT08 1334 aa24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 DDNO94850 711 aaPredicted RBP24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 CCDC129Q6ZRS4 1044 aa24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 TEKT1Q969V4 418 aa24.54■■□□□ 1.52
CDC42SE2-206ENST00000503291 ZC3H4Q9UPT8 1303 aaKnown RBP24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 CRKP46108 304 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 HHIPL2Q6UWX4 724 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 ZNF589Q86UQ0 364 aaPredicted RBP24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 DPF2Q92785 391 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 SERPINA10Q9UK55 444 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 HDAC9Q9UKV0 1011 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 GAKO14976 1311 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 RAD50Q92878 1312 aa24.53■■□□□ 1.52
CDC42SE2-206ENST00000503291 DPY19L2Q6NUT2 758 aa24.52■■□□□ 1.52
CDC42SE2-206ENST00000503291 AIDAQ96BJ3 306 aa24.52■■□□□ 1.52
CDC42SE2-206ENST00000503291 BACH2Q9BYV9 841 aa24.52■■□□□ 1.52
CDC42SE2-206ENST00000503291 AATFQ9NY61 560 aaKnown RBP eCLIP24.52■■□□□ 1.52
CDC42SE2-206ENST00000503291 DAGLAQ9Y4D2 1042 aa24.52■■□□□ 1.52
CDC42SE2-206ENST00000503291 MAGEB6P1A0A0J9YX57 407 aa24.52■■□□□ 1.52
CDC42SE2-206ENST00000503291 GPR75-ASB3A0A0A6YYF3 556 aa24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 GPAA1O43292 621 aa24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 SEC24BO95487 1268 aa24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 DYNLL1P63167 89 aaKnown RBP24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 RIOK1Q9BRS2 568 aaKnown RBP24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 MBD4O95243 580 aa24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 RBM5P52756 815 aaKnown RBP eCLIP24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 ZDHHC15Q96MV8 337 aa24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 ARMT1Q9H993 441 aa24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 CNOT7Q9UIV1 285 aaKnown RBP24.51■■□□□ 1.51
CDC42SE2-206ENST00000503291 CCDC171Q6TFL3 1326 aa24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 SHTN1A0MZ66 631 aa24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 BAG3O95817 575 aa24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 BTDP43251 543 aa24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 LCORLQ8N3X6 602 aa24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 STRBPQ96SI9 672 aaKnown RBP24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 NOL10Q9BSC4 688 aaKnown RBP24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 PCDHAC2Q9Y5I4 1007 aa24.5■■□□□ 1.51
CDC42SE2-206ENST00000503291 PPP4CP60510 307 aa24.49■■□□□ 1.51
CDC42SE2-206ENST00000503291 CFAP100Q494V2 611 aa24.49■■□□□ 1.51
CDC42SE2-206ENST00000503291 APOBEC3HQ6NTF7 200 aaKnown RBP24.49■■□□□ 1.51
CDC42SE2-206ENST00000503291 MMP14P50281 582 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms