RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 MYBPC2Q14324 1141 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 DEFB132Q7Z7B7 95 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 DNAAF4Q8WXU2 420 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 CARD6Q9BX69 1037 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 PDE11AQ9HCR9 933 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 SSH2Q76I76 1423 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ABCC4O15439 1325 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 PNMA6EA0A0J9YXQ4 647 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCDC69A6NI79 296 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 HTATSF1O43719 755 aaKnown RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 TMCO3Q6UWJ1 677 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ARMCX6Q7L4S7 300 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 RPAP2Q8IXW5 612 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 MIEF2Q96C03 454 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 BICC1Q9H694 974 aaKnown RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZSWIM4Q9H7M6 989 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 L2HGDHQ9H9P8 463 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 FAN1Q9Y2M0 1017 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCDC194A0A1B0GVG4 234 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ST18O60284 1047 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 FAM163BP0C2L3 166 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 NBPF7P0C2Y1 421 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 NEXNQ0ZGT2 675 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 TEX35Q5T0J7 233 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 INTS3Q68E01 1043 aaKnown RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 CASC1Q6TDU7 716 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 CLEC4GQ6UXB4 293 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ANKRD44Q8N8A2 993 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ATL2Q8NHH9 583 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZNF496Q96IT1 587 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 MYD88Q99836 296 aa6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 MED1Q15648 1581 aaPredicted RBP6.68□□□□□ -1.34
SOX2-OT-218ENST00000498731 KNDC1Q76NI1 1749 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 DDX58O95786 925 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 APLP1P51693 650 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 TTLL12Q14166 644 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 C11orf57Q6ZUT1 292 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 GET4Q7L5D6 327 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 COPS6Q7L5N1 327 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 PPP1R42Q7Z4L9 355 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 SEPT12Q8IYM1 358 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 IQUBQ8NA54 791 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZCRB1Q8TBF4 217 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 DBF4Q9UBU7 674 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 PHLPP1O60346 1717 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 SOS2Q07890 1332 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 SPATA31A3Q5VYP0 1347 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 KIF1CO43896 1103 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 CAPN15O75808 1086 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 CRB1P82279 1406 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 CUL4AQ13619 759 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 TTC22Q5TAA0 569 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 FAM200AQ8TCP9 573 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 XAGE3Q8WTP9 111 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 GJD4Q96KN9 370 aaPredicted RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 PPP1R13BQ96KQ4 1090 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 PA2G4Q9UQ80 394 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 ADGRB2O60241 1585 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 MYO1FO00160 1098 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 TPM4P67936 248 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 SCRN1Q12765 414 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 TSHZ1Q6ZSZ6 1077 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 FERMT3Q86UX7 667 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 GOLGA6L1Q8N7Z2 621 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZBTB3Q9H5J0 574 aa6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 CHD2O14647 1828 aaKnown RBP6.67□□□□□ -1.34
SOX2-OT-218ENST00000498731 PSDA5PKW4 1024 aaPredicted RBP6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 EXOC5O00471 708 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 TADA3O75528 432 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 C9orf131Q5VYM1 1079 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 ZNF790Q6PG37 636 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 TADA2BQ86TJ2 420 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 UNC5CLQ8IV45 518 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 JMYQ8N9B5 988 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 LRRCC1Q9C099 1032 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 IRAK4Q9NWZ3 460 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 PHKG2P15735 406 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 SYT1P21579 422 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 UBE2HP62256 183 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 C11orf96Q7Z7L8 435 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 TTC6Q86TZ1 520 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 CREBRFQ8IUR6 639 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 PARD3BQ8TEW8 1205 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 PPM1EQ8WY54 764 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 TATDN2Q93075 761 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 CEP89Q96ST8 783 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 DCTPP1Q9H773 170 aa6.66□□□□□ -1.34
SOX2-OT-218ENST00000498731 KLHL33A6NCF5 533 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 MPHOSPH10O00566 681 aaKnown RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 CYP27B1O15528 508 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 EPB41L2O43491 1005 aaKnown RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 GIGYF1O75420 1035 aaPredicted RBP6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 CDC25CP30307 473 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 CCDC96Q2M329 555 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 LONRF3Q496Y0 759 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 NAALADL2Q58DX5 795 aa6.65□□□□□ -1.34
SOX2-OT-218ENST00000498731 NBPF11Q86T75 865 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms