RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 BAZ2AQ9UIF9 1905 aaKnown RBP16.45■□□□□ 0.22
CPNE1-227ENST00000498056 VIL1P09327 827 aaKnown RBP16.44■□□□□ 0.22
CPNE1-227ENST00000498056 GMPSP49915 693 aaPredicted RBP16.44■□□□□ 0.22
CPNE1-227ENST00000498056 FKBP1AP62942 108 aaKnown RBP16.44■□□□□ 0.22
CPNE1-227ENST00000498056 KBTBD3Q8NAB2 608 aa16.44■□□□□ 0.22
CPNE1-227ENST00000498056 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.44■□□□□ 0.22
CPNE1-227ENST00000498056 TTF2Q9UNY4 1162 aaKnown RBP16.44■□□□□ 0.22
CPNE1-227ENST00000498056 MYH1P12882 1939 aa16.44■□□□□ 0.22
CPNE1-227ENST00000498056 DDNO94850 711 aaPredicted RBP16.43■□□□□ 0.22
CPNE1-227ENST00000498056 SDSP20132 328 aa16.43■□□□□ 0.22
CPNE1-227ENST00000498056 SCNN1DP51172 638 aa16.43■□□□□ 0.22
CPNE1-227ENST00000498056 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
CPNE1-227ENST00000498056 BMP2KLQ5H9B9 411 aa16.43■□□□□ 0.22
CPNE1-227ENST00000498056 AGBL3Q8NEM8 1001 aa16.43■□□□□ 0.22
CPNE1-227ENST00000498056 MYH8P13535 1937 aa16.43■□□□□ 0.22
CPNE1-227ENST00000498056 LAMA4Q16363 1823 aa16.42■□□□□ 0.22
CPNE1-227ENST00000498056 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
CPNE1-227ENST00000498056 POLR2AP24928 1970 aaKnown RBP16.42■□□□□ 0.22
CPNE1-227ENST00000498056 RPS12P25398 132 aaKnown RBP16.42■□□□□ 0.22
CPNE1-227ENST00000498056 MECOMQ03112 1051 aa16.42■□□□□ 0.22
CPNE1-227ENST00000498056 DPY19L2Q6NUT2 758 aa16.42■□□□□ 0.22
CPNE1-227ENST00000498056 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
CPNE1-227ENST00000498056 PDE6AP16499 860 aa16.41■□□□□ 0.22
CPNE1-227ENST00000498056 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-227ENST00000498056 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
CPNE1-227ENST00000498056 NAA16Q6N069 864 aaPredicted RBP16.41■□□□□ 0.22
CPNE1-227ENST00000498056 ZSCAN25Q6NSZ9 544 aa16.41■□□□□ 0.22
CPNE1-227ENST00000498056 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
CPNE1-227ENST00000498056 HDAC9Q9UKV0 1011 aa16.41■□□□□ 0.22
CPNE1-227ENST00000498056 SUGT1Q9Y2Z0 365 aa16.41■□□□□ 0.22
CPNE1-227ENST00000498056 SHTN1A0MZ66 631 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 RBM5P52756 815 aaKnown RBP eCLIP16.4■□□□□ 0.22
CPNE1-227ENST00000498056 LRRFIP1Q32MZ4 808 aaKnown RBP16.4■□□□□ 0.22
CPNE1-227ENST00000498056 SLC9C2Q5TAH2 1124 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 OGFOD1Q8N543 542 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
CPNE1-227ENST00000498056 GMLQ99445 158 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 DIAPH3Q9NSV4 1193 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 MROH7-TTC4A0A0A0MT08 1334 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 ZNF532Q9HCE3 1301 aa16.4■□□□□ 0.22
CPNE1-227ENST00000498056 GLTPD2A6NH11 291 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 CHGBP05060 677 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 CYP7A1P22680 504 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 ADD2P35612 726 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 GSTO1P78417 241 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 SLFNL1Q499Z3 407 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 ZNF526Q8TF50 670 aaPredicted RBP16.39■□□□□ 0.21
CPNE1-227ENST00000498056 TEKT1Q969V4 418 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 GPRC5DQ9NZD1 345 aa16.39■□□□□ 0.21
CPNE1-227ENST00000498056 ZFYP08048 801 aaPredicted RBP16.38■□□□□ 0.21
CPNE1-227ENST00000498056 CRKP46108 304 aa16.38■□□□□ 0.21
CPNE1-227ENST00000498056 SLF2Q8IX21 1173 aa16.38■□□□□ 0.21
CPNE1-227ENST00000498056 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
CPNE1-227ENST00000498056 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
CPNE1-227ENST00000498056 RNF113AO15541 343 aaKnown RBP16.37■□□□□ 0.21
CPNE1-227ENST00000498056 CDC45O75419 566 aa16.37■□□□□ 0.21
CPNE1-227ENST00000498056 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
CPNE1-227ENST00000498056 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
CPNE1-227ENST00000498056 MIGA1Q8NAN2 632 aa16.37■□□□□ 0.21
CPNE1-227ENST00000498056 DPF2Q92785 391 aa16.37■□□□□ 0.21
CPNE1-227ENST00000498056 L3MBTL3Q96JM7 780 aaPredicted RBP16.37■□□□□ 0.21
CPNE1-227ENST00000498056 CNOT7Q9UIV1 285 aaKnown RBP16.37■□□□□ 0.21
CPNE1-227ENST00000498056 DAGLAQ9Y4D2 1042 aa16.37■□□□□ 0.21
CPNE1-227ENST00000498056 TCRBV5S4A2TA0A5A2 114 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 H7C1D1 291 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 HIP1O00291 1037 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 BTDP43251 543 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 NMIQ13287 307 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-227ENST00000498056 KIF4BQ2VIQ3 1234 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 TBC1D10BQ4KMP7 808 aaPredicted RBP16.36■□□□□ 0.21
CPNE1-227ENST00000498056 APPBP2Q92624 585 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 MYOZ2Q9NPC6 264 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 HACL1Q9UJ83 578 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 SERPINA10Q9UK55 444 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 PCDHAC2Q9Y5I4 1007 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 GAKO14976 1311 aa16.36■□□□□ 0.21
CPNE1-227ENST00000498056 A0A0D9SFI3 127 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 IGSF3O75054 1194 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 LDHCP07864 332 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 EPS15P42566 896 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 UBE3CQ15386 1083 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 DLGAP5Q15398 846 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 RBM26Q5T8P6 1007 aaKnown RBP16.35■□□□□ 0.21
CPNE1-227ENST00000498056 CASC1Q6TDU7 716 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 CWC27Q6UX04 472 aaKnown RBP16.35■□□□□ 0.21
CPNE1-227ENST00000498056 TRPM4Q8TD43 1214 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 FAM227BQ96M60 508 aa16.35■□□□□ 0.21
CPNE1-227ENST00000498056 AATFQ9NY61 560 aaKnown RBP eCLIP16.35■□□□□ 0.21
CPNE1-227ENST00000498056 SIPA1L1O43166 1804 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 MAGEB6P1A0A0J9YX57 407 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 IQCA1LA6NCM1 817 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 M0R2C6 588 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 MBD4O95243 580 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 EGFRP00533 1210 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 ZNF280AP59817 542 aaPredicted RBP16.34■□□□□ 0.21
CPNE1-227ENST00000498056 HDLBPQ00341 1268 aaKnown RBP16.34■□□□□ 0.21
CPNE1-227ENST00000498056 HHIPL2Q6UWX4 724 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
CPNE1-227ENST00000498056 AIDAQ96BJ3 306 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms