RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 RBM26Q5T8P6 1007 aaKnown RBP14.47□□□□□ -0.09
CUX1-210ENST00000497815 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
CUX1-210ENST00000497815 ERICH6Q7L0X2 663 aa14.47□□□□□ -0.09
CUX1-210ENST00000497815 DZIP1Q86YF9 867 aaKnown RBP14.47□□□□□ -0.09
CUX1-210ENST00000497815 OGFOD1Q8N543 542 aa14.47□□□□□ -0.09
CUX1-210ENST00000497815 DPF2Q92785 391 aa14.47□□□□□ -0.09
CUX1-210ENST00000497815 RRAGCQ9HB90 399 aa14.47□□□□□ -0.09
CUX1-210ENST00000497815 AOX1Q06278 1338 aa14.46□□□□□ -0.09
CUX1-210ENST00000497815 H7C1D1 291 aa14.46□□□□□ -0.09
CUX1-210ENST00000497815 RBM5P52756 815 aaKnown RBP eCLIP14.46□□□□□ -0.094e-7■■■□□ 19.1
CUX1-210ENST00000497815 L3MBTL3Q96JM7 780 aaPredicted RBP14.46□□□□□ -0.09
CUX1-210ENST00000497815 OSBPL3Q9H4L5 887 aa14.46□□□□□ -0.09
CUX1-210ENST00000497815 NMRK2Q9NPI5 230 aa14.46□□□□□ -0.09
CUX1-210ENST00000497815 HACL1Q9UJ83 578 aa14.46□□□□□ -0.09
CUX1-210ENST00000497815 HDAC9Q9UKV0 1011 aa14.46□□□□□ -0.09
CUX1-210ENST00000497815 AKAP11Q9UKA4 1901 aa14.45□□□□□ -0.1
CUX1-210ENST00000497815 TRIM6-TRIM34B2RNG4 842 aa14.45□□□□□ -0.1
CUX1-210ENST00000497815 MECOMQ03112 1051 aa14.45□□□□□ -0.1
CUX1-210ENST00000497815 TTF1Q15361 905 aaPredicted RBP14.45□□□□□ -0.1
CUX1-210ENST00000497815 DIXDC1Q155Q3 683 aa14.45□□□□□ -0.1
CUX1-210ENST00000497815 TBC1D10BQ4KMP7 808 aaPredicted RBP14.45□□□□□ -0.1
CUX1-210ENST00000497815 SAMD7Q7Z3H4 446 aa14.45□□□□□ -0.1
CUX1-210ENST00000497815 GPBP1L1Q9HC44 474 aaPredicted RBP14.45□□□□□ -0.1
CUX1-210ENST00000497815 SUGT1Q9Y2Z0 365 aa14.45□□□□□ -0.1
CUX1-210ENST00000497815 IQCA1LA6NCM1 817 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 POTECB2RU33 542 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
CUX1-210ENST00000497815 EGFRP00533 1210 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 EPHX2P34913 555 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 RILPL2Q969X0 211 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 MYOZ2Q9NPC6 264 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 PCDHAC2Q9Y5I4 1007 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 WDR90Q96KV7 1748 aa14.44□□□□□ -0.1
CUX1-210ENST00000497815 MAST3O60307 1309 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 VEGFAP15692 232 aaPredicted RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 CRKP46108 304 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 ZNF280AP59817 542 aaPredicted RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 MAP3K12Q12852 859 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 KIF4BQ2VIQ3 1234 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 CFAP100Q494V2 611 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 EAPPQ56P03 285 aaPredicted RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 TTC22Q5TAA0 569 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 NAA16Q6N069 864 aaPredicted RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 MAGEB6Q8N7X4 407 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 TRPM4Q8TD43 1214 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 TEKT1Q969V4 418 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 NSUN4Q96CB9 384 aaKnown RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
CUX1-210ENST00000497815 TAF1DQ9H5J8 278 aaPredicted RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 ADARB2Q9NS39 739 aaKnown RBP14.43□□□□□ -0.1
CUX1-210ENST00000497815 ADAMTSL1Q8N6G6 1762 aa14.42□□□□□ -0.1
CUX1-210ENST00000497815 DLGAP5Q15398 846 aa14.42□□□□□ -0.1
CUX1-210ENST00000497815 SLC9C2Q5TAH2 1124 aa14.42□□□□□ -0.1
CUX1-210ENST00000497815 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
CUX1-210ENST00000497815 ZNF384Q8TF68 577 aa14.42□□□□□ -0.1
CUX1-210ENST00000497815 SERPINA10Q9UK55 444 aa14.42□□□□□ -0.1
CUX1-210ENST00000497815 CHGBP05060 677 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 GSPT1P15170 499 aaKnown RBP14.41□□□□□ -0.1
CUX1-210ENST00000497815 PDE6AP16499 860 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 CYP7A1P22680 504 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 GSTO1P78417 241 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 SLFNL1Q499Z3 407 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 CNTROBQ8N137 903 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 ZNF784Q8NCA9 323 aaPredicted RBP14.41□□□□□ -0.1
CUX1-210ENST00000497815 EVI5LQ96CN4 794 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.41□□□□□ -0.13e-7■■□□□ 13.2
CUX1-210ENST00000497815 DAGLAQ9Y4D2 1042 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 ZNF532Q9HCE3 1301 aa14.41□□□□□ -0.1
CUX1-210ENST00000497815 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
CUX1-210ENST00000497815 HDLBPQ00341 1268 aaKnown RBP14.4□□□□□ -0.1
CUX1-210ENST00000497815 NBPF9Q3BBW0 867 aa14.4□□□□□ -0.1
CUX1-210ENST00000497815 HHIPL2Q6UWX4 724 aa14.4□□□□□ -0.1
CUX1-210ENST00000497815 ADGRA1Q86SQ6 560 aa14.4□□□□□ -0.1
CUX1-210ENST00000497815 SLF2Q8IX21 1173 aa14.4□□□□□ -0.1
CUX1-210ENST00000497815 PRMT6Q96LA8 375 aaPredicted RBP14.4□□□□□ -0.1
CUX1-210ENST00000497815 ASTN2O75129 1339 aaPredicted RBP14.4□□□□□ -0.1
CUX1-210ENST00000497815 MAST2Q6P0Q8 1798 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 SCN4AP35499 1836 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 DOCK2Q92608 1830 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 LDHCP07864 332 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 POTEIP0CG38 1075 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 POTEJP0CG39 1038 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 SDSP20132 328 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 ADD2P35612 726 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 MMP14P50281 582 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 ZSCAN25Q6NSZ9 544 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 USP50Q70EL3 339 aaPredicted RBP14.39□□□□□ -0.11
CUX1-210ENST00000497815 PNMA8AQ86V59 439 aaPredicted RBP14.39□□□□□ -0.11
CUX1-210ENST00000497815 MIGA1Q8NAN2 632 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 ZDHHC15Q96MV8 337 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 TDRD3Q9H7E2 651 aaKnown RBP14.39□□□□□ -0.11
CUX1-210ENST00000497815 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
CUX1-210ENST00000497815 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
CUX1-210ENST00000497815 CLRN2A0PK11 232 aa14.38□□□□□ -0.11
CUX1-210ENST00000497815 WNT10BO00744 389 aa14.38□□□□□ -0.11
CUX1-210ENST00000497815 RNF113AO15541 343 aaKnown RBP14.38□□□□□ -0.11
CUX1-210ENST00000497815 BTDP43251 543 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms