RNA–Protein interactions for RNA: ENST00000497179.1

USP11-212, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 900 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-212ENST00000497179 AOX1Q06278 1338 aa17.61■□□□□ 0.41
USP11-212ENST00000497179 KIF3CO14782 793 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 ERC2O15083 957 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 IGSF3O75054 1194 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 GLRX3O76003 335 aaKnown RBP17.6■□□□□ 0.41
USP11-212ENST00000497179 PDE4AP27815 886 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 HDLBPQ00341 1268 aaKnown RBP17.6■□□□□ 0.41
USP11-212ENST00000497179 KIF4BQ2VIQ3 1234 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 TBC1D9Q6ZT07 1266 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
USP11-212ENST00000497179 ERICH6Q7L0X2 663 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 TRPM4Q8TD43 1214 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 DNAJC2Q99543 621 aaKnown RBP17.6■□□□□ 0.41
USP11-212ENST00000497179 PIH1D3Q9NQM4 214 aaKnown RBP17.6■□□□□ 0.41
USP11-212ENST00000497179 SERPINA10Q9UK55 444 aa17.6■□□□□ 0.41
USP11-212ENST00000497179 EGFRP00533 1210 aa17.59■□□□□ 0.41
USP11-212ENST00000497179 TTF1Q15361 905 aaPredicted RBP17.59■□□□□ 0.41
USP11-212ENST00000497179 TBC1D10BQ4KMP7 808 aaPredicted RBP17.59■□□□□ 0.41
USP11-212ENST00000497179 SAMD7Q7Z3H4 446 aa17.59■□□□□ 0.41
USP11-212ENST00000497179 PNMA8AQ86V59 439 aaPredicted RBP17.59■□□□□ 0.41
USP11-212ENST00000497179 MTMR14Q8NCE2 650 aa17.59■□□□□ 0.41
USP11-212ENST00000497179 ZBED3Q96IU2 234 aaPredicted RBP17.59■□□□□ 0.41
USP11-212ENST00000497179 OSBPL3Q9H4L5 887 aa17.59■□□□□ 0.41
USP11-212ENST00000497179 ANTXR1Q9H6X2 564 aa17.59■□□□□ 0.41
USP11-212ENST00000497179 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
USP11-212ENST00000497179 GOLIM4O00461 696 aa17.58■□□□□ 0.4
USP11-212ENST00000497179 CRKP46108 304 aa17.58■□□□□ 0.4
USP11-212ENST00000497179 DZIP1Q86YF9 867 aaKnown RBP17.58■□□□□ 0.4
USP11-212ENST00000497179 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
USP11-212ENST00000497179 MRIQ9BWK5 157 aa17.58■□□□□ 0.4
USP11-212ENST00000497179 LRP2BPQ9P2M1 347 aa17.58■□□□□ 0.4
USP11-212ENST00000497179 HIRAP54198 1017 aaPredicted RBP17.57■□□□□ 0.4
USP11-212ENST00000497179 MECOMQ03112 1051 aa17.57■□□□□ 0.4
USP11-212ENST00000497179 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
USP11-212ENST00000497179 HHIPL2Q6UWX4 724 aa17.57■□□□□ 0.4
USP11-212ENST00000497179 ZNF384Q8TF68 577 aa17.57■□□□□ 0.4
USP11-212ENST00000497179 TEKT1Q969V4 418 aa17.57■□□□□ 0.4
USP11-212ENST00000497179 NSUN4Q96CB9 384 aaKnown RBP17.57■□□□□ 0.4
USP11-212ENST00000497179 EDC3Q96F86 508 aaKnown RBP17.57■□□□□ 0.4
USP11-212ENST00000497179 RAI14Q9P0K7 980 aa17.57■□□□□ 0.4
USP11-212ENST00000497179 GAKO14976 1311 aa17.56■□□□□ 0.4
USP11-212ENST00000497179 SPDYE2BA6NHP3 402 aa17.56■□□□□ 0.4
USP11-212ENST00000497179 SPDYE6P0CI01 402 aa17.56■□□□□ 0.4
USP11-212ENST00000497179 DLGAP5Q15398 846 aa17.56■□□□□ 0.4
USP11-212ENST00000497179 DIXDC1Q155Q3 683 aa17.56■□□□□ 0.4
USP11-212ENST00000497179 EAPPQ56P03 285 aaPredicted RBP17.56■□□□□ 0.4
USP11-212ENST00000497179 RBM26Q5T8P6 1007 aaKnown RBP17.56■□□□□ 0.4
USP11-212ENST00000497179 LDHDQ86WU2 507 aa17.56■□□□□ 0.4
USP11-212ENST00000497179 MYO5AQ9Y4I1 1855 aaKnown RBP17.56■□□□□ 0.4
USP11-212ENST00000497179 MROH7-TTC4A0A0A0MT08 1334 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 WNT10BO00744 389 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 IDH1O75874 414 aaKnown RBP17.55■□□□□ 0.4
USP11-212ENST00000497179 POTEIP0CG38 1075 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 POTEJP0CG39 1038 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 GSTO1P78417 241 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 MAP3K12Q12852 859 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 TMED8Q6PL24 325 aaPredicted RBP17.55■□□□□ 0.4
USP11-212ENST00000497179 SLF2Q8IX21 1173 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 ZC3H15Q8WU90 426 aaKnown RBP17.55■□□□□ 0.4
USP11-212ENST00000497179 ZDHHC15Q96MV8 337 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 DAGLAQ9Y4D2 1042 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 ECM29Q5VYK3 1845 aa17.55■□□□□ 0.4
USP11-212ENST00000497179 RBM5P52756 815 aaKnown RBP eCLIP17.54■□□□□ 0.4
USP11-212ENST00000497179 NBPF9Q3BBW0 867 aa17.54■□□□□ 0.4
USP11-212ENST00000497179 NAA16Q6N069 864 aaPredicted RBP17.54■□□□□ 0.4
USP11-212ENST00000497179 FAM163AQ96GL9 167 aaPredicted RBP17.54■□□□□ 0.4
USP11-212ENST00000497179 PGAP2Q9UHJ9 254 aa17.54■□□□□ 0.4
USP11-212ENST00000497179 MYH2Q9UKX2 1941 aa17.53■□□□□ 0.4
USP11-212ENST00000497179 LDHCP07864 332 aa17.53■□□□□ 0.4
USP11-212ENST00000497179 APOBEC3HQ6NTF7 200 aaKnown RBP17.53■□□□□ 0.4
USP11-212ENST00000497179 KBTBD3Q8NAB2 608 aa17.53■□□□□ 0.4
USP11-212ENST00000497179 PRMT6Q96LA8 375 aaPredicted RBP17.53■□□□□ 0.4
USP11-212ENST00000497179 ASTN2O75129 1339 aaPredicted RBP17.52■□□□□ 0.4
USP11-212ENST00000497179 PITPNM2Q9BZ72 1349 aa17.52■□□□□ 0.4
USP11-212ENST00000497179 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.4
USP11-212ENST00000497179 PDE6AP16499 860 aa17.52■□□□□ 0.4
USP11-212ENST00000497179 RBM46Q8TBY0 533 aaKnown RBP17.52■□□□□ 0.4
USP11-212ENST00000497179 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.52■□□□□ 0.4
USP11-212ENST00000497179 GGA3Q9NZ52 723 aa17.52■□□□□ 0.4
USP11-212ENST00000497179 MYH7P12883 1935 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 MYO1BO43795 1136 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 TOMM70O94826 608 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 SPDYE2Q495Y8 402 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 SLC9C2Q5TAH2 1124 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 CHADLQ6NUI6 762 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 MAGEB6Q8N7X4 407 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 CLEC11AQ9Y240 323 aa17.51■□□□□ 0.39
USP11-212ENST00000497179 GPR75-ASB3A0A0A6YYF3 556 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 TCRBV5S4A2TA0A5A2 114 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 CYP7A1P22680 504 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 TTC22Q5TAA0 569 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 ANGEL2Q5VTE6 544 aaKnown RBP17.5■□□□□ 0.39
USP11-212ENST00000497179 ZSCAN25Q6NSZ9 544 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 ADGRA1Q86SQ6 560 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 EVI5LQ96CN4 794 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
USP11-212ENST00000497179 ADD2P35612 726 aa17.49■□□□□ 0.39
USP11-212ENST00000497179 BTDP43251 543 aa17.49■□□□□ 0.39
USP11-212ENST00000497179 UBE3CQ15386 1083 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms