RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 HAUS7Q99871 368 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC196A0A1B0GTZ2 297 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 TNFAIP1Q13829 316 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 STYK1Q6J9G0 422 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 DDX11Q96FC9 970 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 PICK1Q9NRD5 415 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 WTAPQ15007 396 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 IFIT1BQ5T764 474 aaKnown RBP11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 SULF1Q8IWU6 871 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 PHRF1Q9P1Y6 1649 aaKnown RBP11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 RAD50Q92878 1312 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 CLRN2A0PK11 232 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 SIRT2Q8IXJ6 389 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 HOOK2Q96ED9 719 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
GAPVD1-219ENST00000495955 PDCP20941 246 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 PPP4R3BQ5MIZ7 849 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 MICU3Q86XE3 530 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 K7ELQ4 463 aaPredicted RBP11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 GRIN3BO60391 1043 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 PDE6AP16499 860 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 CDK11BP21127 795 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 CCT2P78371 535 aaKnown RBP11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 ATP6V0A2Q9Y487 856 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 PTMSP20962 102 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 KIF5BP33176 963 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 WASF1Q92558 559 aa11.09□□□□□ -0.63
GAPVD1-219ENST00000495955 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.63
GAPVD1-219ENST00000495955 COL16A1Q07092 1604 aaPredicted RBP11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 POLRMTO00411 1230 aaKnown RBP11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 MTX1Q13505 466 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 TCEANC2Q96MN5 208 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 PNPLA7Q6ZV29 1317 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 NUCB2P80303 420 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 RASGRF1Q13972 1273 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 CHST3Q7LGC8 479 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 CD209Q9NNX6 404 aa11.08□□□□□ -0.64
GAPVD1-219ENST00000495955 TGFB2P61812 414 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 LARP1BQ659C4 914 aaKnown RBP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 PODNQ7Z5L7 613 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 TBC1D16Q8TBP0 767 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 DISP2A7MBM2 1401 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 PRDM1O75626 825 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 ZNF76P36508 570 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 RABL6Q3YEC7 729 aaPredicted RBP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 CREB3L3Q68CJ9 461 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 UPF1Q92900 1129 aaKnown RBP eCLIP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 ANTXR1Q9H6X2 564 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 CSF1RP07333 972 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 RGS12O14924 1447 aa11.07□□□□□ -0.64
GAPVD1-219ENST00000495955 PRC1O43663 620 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 HOMER1Q86YM7 354 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 SDR42E1Q8WUS8 393 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 CAMKK2Q96RR4 588 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 ZKSCAN3Q9BRR0 538 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 SSRP1Q08945 709 aaKnown RBP11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 BRF1Q92994 677 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 CHMP5Q9NZZ3 219 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 NHSL1Q5SYE7 1610 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 KLF18A0A0U1RQI7 1052 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 ECM2O94769 699 aaPredicted RBP11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 USP17L8P0C7I0 530 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 CTDSPL2Q05D32 466 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 SHPRHQ149N8 1683 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 DDR1Q08345 913 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 PXDNLA1KZ92 1463 aa11.06□□□□□ -0.64
GAPVD1-219ENST00000495955 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 DIXDC1Q155Q3 683 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 TMTC2Q8N394 836 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 SEC62Q99442 399 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 LIMCH1Q9UPQ0 1083 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 ALS2Q96Q42 1657 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 PATL2C9JE40 543 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 CEBPZQ03701 1054 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 ZYXQ15942 572 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 CUL5Q93034 780 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 RIPOR2Q9Y4F9 1068 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 LMO7Q8WWI1 1683 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 PLS1Q14651 629 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 TBC1D10BQ4KMP7 808 aaPredicted RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 L1TD1Q5T7N2 865 aaKnown RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 MCAMP43121 646 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 Q6ZUG5 572 aa11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 TRPM3Q9HCF6 1732 aaPredicted RBP11.05□□□□□ -0.64
GAPVD1-219ENST00000495955 B4E1Z4 1266 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 USP17L12C9JPN9 530 aa11.04□□□□□ -0.64
GAPVD1-219ENST00000495955 USP17L21D6R901 530 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms