RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, human

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA1-204	ENST00000494467	ZMYM6	O95789	1325 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467		A0A0D9SFI3	127 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	LDHB	P07195	334 aa	Known RBP	11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	LDHC	P07864	332 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	YBX3	P16989	372 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	LMNB1	P20700	586 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	GTF2I	P78347	998 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	GSTO1	P78417	241 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	DOK7	Q18PE1	504 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	MFSD14B	Q5SR56	506 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	HHIPL2	Q6UWX4	724 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	SLF2	Q8IX21	1173 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	NIM1K	Q8IY84	436 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	CERS5	Q8N5B7	392 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	IL27	Q8NEV9	243 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	OSBP2	Q969R2	916 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	FAM227B	Q96M60	508 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	DBNDD1	Q9H9R9	158 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	LRP2BP	Q9P2M1	347 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	WWC3	Q9ULE0	1092 aa		11.13	□□□□□ -0.63
ABCA1-204	ENST00000494467	DDX60L	Q5H9U9	1706 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	CCDC171	Q6TFL3	1326 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZNF532	Q9HCE3	1301 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467		G3V3G9	751 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	GRIN3B	O60391	1043 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	IDH1	O75874	414 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	SEC24B	O95487	1268 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	RPS12	P25398	132 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	PRDX5	P30044	214 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	RBM25	P49756	843 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	MECOM	Q03112	1051 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	ALX1	Q15699	326 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	DCAF8	Q5TAQ9	597 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	CWC27	Q6UX04	472 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	AGBL3	Q8NEM8	1001 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	JDP2	Q8WYK2	163 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	MAP4K1	Q92918	833 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	KCNB2	Q92953	911 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	RIOK1	Q9BRS2	568 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	DSCC1	Q9BVC3	393 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	USP26	Q9BXU7	913 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	LSG1	Q9H089	658 aa	Known RBP	11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	IL25	Q9H293	177 aa		11.12	□□□□□ -0.63
ABCA1-204	ENST00000494467	GPR75-ASB3	A0A0A6YYF3	556 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	GNAT2	P19087	354 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	CXCL9	Q07325	125 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	CHAF1A	Q13111	956 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	TNIP1	Q15025	636 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	NAA16	Q6N069	864 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	GIMAP6	Q6P9H5	292 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	MAGEB6	Q8N7X4	407 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	MTMR14	Q8NCE2	650 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	DPF2	Q92785	391 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	STRBP	Q96SI9	672 aa	Known RBP	11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	PUS7L	Q9H0K6	701 aa	Known RBP	11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	ABCF2	Q9UG63	623 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	LAMB1	P07942	1786 aa		11.11	□□□□□ -0.63
ABCA1-204	ENST00000494467	MROH7-TTC4	A0A0A0MT08	1334 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	MYH1	P12882	1939 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	FOXP2	O15409	715 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	NPM3	O75607	178 aa	Known RBP	11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	CYP7A1	P22680	504 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	GRIK5	Q16478	980 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	TSGA10IP	Q3SY00	556 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZDHHC15	Q96MV8	337 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	KCNQ5	Q9NR82	932 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	RAI14	Q9P0K7	980 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	SERPINA10	Q9UK55	444 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	ADAMTSL1	Q8N6G6	1762 aa		11.1	□□□□□ -0.63
ABCA1-204	ENST00000494467	SCN4A	P35499	1836 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	NAV1	Q8NEY1	1877 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467		M0R2C6	588 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	PSMD14	O00487	310 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	CHGB	P05060	677 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	PLCG2	P16885	1265 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZNF280A	P59817	542 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	ANAPC15	P60006	121 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	RASSF7	Q02833	373 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	NECTIN1	Q15223	517 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	CIAPIN1	Q6FI81	312 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	ARHGAP27	Q6ZUM4	889 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	ADGRA1	Q86SQ6	560 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	DZIP1	Q86YF9	867 aa	Known RBP	11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	ZBED3	Q96IU2	234 aa	Predicted RBP	11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	TBC1D32	Q96NH3	1257 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	SEC62	Q99442	399 aa	Known RBP	11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	TAOK2	Q9UL54	1235 aa		11.09	□□□□□ -0.63
ABCA1-204	ENST00000494467	COL2A1	P02458	1487 aa	Predicted RBP	11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	MAGEB6P1	A0A0J9YX57	407 aa		11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	PATL2	C9JE40	543 aa	Known RBP	11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	GPAA1	O43292	621 aa		11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	HSPD1	P10809	573 aa	Known RBP	11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	HSPA4	P34932	840 aa		11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	KIAA1211	Q6ZU35	1233 aa		11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	UPF2	Q9HAU5	1272 aa	Known RBP	11.08	□□□□□ -0.64
ABCA1-204	ENST00000494467	MKRN1	Q9UHC7	482 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms