RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RLBP1P12271 317 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 RAC1P63000 192 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 GSTM4Q03013 218 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 METTL16Q86W50 562 aaKnown RBP6.45□□□□□ -1.38
CD46-216ENST00000490278 BEND7Q8N7W2 519 aaPredicted RBP6.45□□□□□ -1.38
CD46-216ENST00000490278 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 CARD10Q9BWT7 1032 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 GGT7Q9UJ14 662 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 SAMM50Q9Y512 469 aa6.45□□□□□ -1.38
CD46-216ENST00000490278 DEAF1O75398 565 aaPredicted RBP6.44□□□□□ -1.38
CD46-216ENST00000490278 NME2P22392 152 aa6.44□□□□□ -1.38
CD46-216ENST00000490278 C9orf131Q5VYM1 1079 aa6.44□□□□□ -1.38
CD46-216ENST00000490278 ERMP1Q7Z2K6 904 aa6.44□□□□□ -1.38
CD46-216ENST00000490278 FMR1NBQ8N0W7 255 aaPredicted RBP6.44□□□□□ -1.38
CD46-216ENST00000490278 GALNT11Q8NCW6 608 aa6.44□□□□□ -1.38
CD46-216ENST00000490278 NOP53Q9NZM5 478 aaKnown RBP6.44□□□□□ -1.38
CD46-216ENST00000490278 CNTNAP5Q8WYK1 1306 aa6.44□□□□□ -1.38
CD46-216ENST00000490278 TM4SF5O14894 197 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 PAGE1O75459 146 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 TRIM28Q13263 835 aaKnown RBP6.43□□□□□ -1.38
CD46-216ENST00000490278 AP3B2Q13367 1082 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 PWP1Q13610 501 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 MAP3K11Q16584 847 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 TTBK2Q6IQ55 1244 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 FBXO11Q86XK2 927 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 NT5DC4Q86YG4 428 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 RELL1Q8IUW5 271 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 SULF2Q8IWU5 870 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 KLHDC7BQ96G42 594 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 TRIM56Q9BRZ2 755 aaKnown RBP6.43□□□□□ -1.38
CD46-216ENST00000490278 RSRP1Q9BUV0 290 aa6.43□□□□□ -1.38
CD46-216ENST00000490278 ADAM23O75077 832 aa6.42□□□□□ -1.38
CD46-216ENST00000490278 CYP11A1P05108 521 aa6.42□□□□□ -1.38
CD46-216ENST00000490278 ARNTP27540 789 aa6.42□□□□□ -1.38
CD46-216ENST00000490278 ERCC5P28715 1186 aaPredicted RBP6.42□□□□□ -1.38
CD46-216ENST00000490278 CD68P34810 354 aaPredicted RBP6.42□□□□□ -1.38
CD46-216ENST00000490278 LIG3P49916 1009 aa6.42□□□□□ -1.38
CD46-216ENST00000490278 RPS26P62854 115 aaKnown RBP6.42□□□□□ -1.38
CD46-216ENST00000490278 PCNX4Q63HM2 1172 aa6.42□□□□□ -1.38
CD46-216ENST00000490278 SCARF2Q96GP6 870 aaPredicted RBP6.42□□□□□ -1.38
CD46-216ENST00000490278 EMILIN2Q9BXX0 1053 aa6.42□□□□□ -1.38
CD46-216ENST00000490278 BMP6P22004 513 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 NLRP12P59046 1061 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 PRRT3Q5FWE3 981 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 USP48Q86UV5 1035 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 STK35Q8TDR2 534 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 TMEM74Q96NL1 305 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 CORO1BQ9BR76 489 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 NRSN2Q9GZP1 204 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 COPRSQ9NQ92 184 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 KBTBD4Q9NVX7 518 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 CYP8B1Q9UNU6 501 aa6.41□□□□□ -1.38
CD46-216ENST00000490278 F6X3S4 739 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 FAM229AH3BQW9 127 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 DLL1O00548 723 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 GSTP1P09211 210 aaKnown RBP6.4□□□□□ -1.38
CD46-216ENST00000490278 ELNP15502 786 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 MAOBP27338 520 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 GBP2P32456 591 aaPredicted RBP6.4□□□□□ -1.38
CD46-216ENST00000490278 RAD51AP2Q09MP3 1159 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 LRRC14Q15048 493 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 POU4F3Q15319 338 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 FOXD4L6Q3SYB3 417 aaPredicted RBP6.4□□□□□ -1.38
CD46-216ENST00000490278 ZNF394Q53GI3 561 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 FOXD4L3Q6VB84 417 aaPredicted RBP6.4□□□□□ -1.38
CD46-216ENST00000490278 AGMOQ6ZNB7 445 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 USP26Q9BXU7 913 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 CBX8Q9HC52 389 aa6.4□□□□□ -1.38
CD46-216ENST00000490278 MINDY4BA8MYZ0 360 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 DDX3YO15523 660 aaKnown RBP6.39□□□□□ -1.39
CD46-216ENST00000490278 ADAM11O75078 769 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 LMNB1P20700 586 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 ZNF252P-AS1Q0IIN9 211 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 LLGL2Q6P1M3 1020 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 PDZD3Q86UT5 571 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 ZNF654Q8IZM8 581 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 PHC3Q8NDX5 983 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 TGIF2Q9GZN2 237 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 KCNK4Q9NYG8 393 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 DDX41Q9UJV9 622 aaKnown RBP6.39□□□□□ -1.39
CD46-216ENST00000490278 TLR6Q9Y2C9 796 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.39□□□□□ -1.39
CD46-216ENST00000490278 PCDHGB7Q9Y5F8 929 aa6.39□□□□□ -1.39
CD46-216ENST00000490278 LOC100289279A0A1B0GTE1 492 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 ECEL1O95672 775 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 SPATA31C1P0DKV0 1188 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 RACK1P63244 317 aaKnown RBP6.38□□□□□ -1.39
CD46-216ENST00000490278 DUOXA2Q1HG44 320 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 HP1BP3Q5SSJ5 553 aaPredicted RBP6.38□□□□□ -1.39
CD46-216ENST00000490278 RASIP1Q5U651 963 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 MAP1SQ66K74 1059 aaPredicted RBP6.38□□□□□ -1.39
CD46-216ENST00000490278 SCARA3Q6AZY7 606 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 IGF2-ASQ6U949 168 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 GRIN3AQ8TCU5 1115 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 KCNB2Q92953 911 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 RHOVQ96L33 236 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 CCSER2Q9H7U1 834 aa6.38□□□□□ -1.39
CD46-216ENST00000490278 TRIM37O94972 964 aa6.37□□□□□ -1.39
CD46-216ENST00000490278 PF4P02776 101 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms