RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	MAST3	O60307	1309 aa		13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	WDR33	Q9C0J8	1336 aa	Known RBP	13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	MYCN	P04198	464 aa	Predicted RBP	13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	PHKA1	P46020	1223 aa		13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	HDLBP	Q00341	1268 aa	Known RBP	13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	GRIK5	Q16478	980 aa		13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	GORAB	Q5T7V8	394 aa		13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	NOP58	Q9Y2X3	529 aa	Known RBP	13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	PCDHAC2	Q9Y5I4	1007 aa		13.68	□□□□□ -0.22
GGA1-222	ENST00000489772	ZBTB22	O15209	634 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	NF2	P35240	595 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	CRK	P46108	304 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	HUNK	P57058	714 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	FKBP1B	P68106	108 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	GRM1	Q13255	1194 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	CYP4F22	Q6NT55	531 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	TEKT1	Q969V4	418 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	CAPNS2	Q96L46	248 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	MRI	Q9BWK5	157 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	DEFB129	Q9H1M3	183 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	VEZT	Q9HBM0	779 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	ZBTB40	Q9NUA8	1239 aa		13.67	□□□□□ -0.22
GGA1-222	ENST00000489772	CLRN2	A0PK11	232 aa		13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	C20orf194	Q5TEA3	1177 aa		13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	PRAMEF18	Q5VWM3	479 aa		13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	ZGPAT	Q8N5A5	531 aa	Known RBP	13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	GPR108	Q9NPR9	543 aa		13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	PPP2R3B	Q9Y5P8	575 aa		13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	ZNF646	O15015	1829 aa	Predicted RBP	13.66	□□□□□ -0.22
GGA1-222	ENST00000489772	HMMR	O75330	724 aa		13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	LDHB	P07195	334 aa	Known RBP	13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	RASGRF1	Q13972	1273 aa		13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	TNNI3K	Q59H18	835 aa		13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	ERC1	Q8IUD2	1116 aa		13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	ZDHHC15	Q96MV8	337 aa		13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	FPGT-TNNI3K	V9GXZ4	949 aa		13.65	□□□□□ -0.22
GGA1-222	ENST00000489772	PDS5A	Q29RF7	1337 aa	Known RBP	13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	SALL1	Q9NSC2	1324 aa		13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	COL1A1	P02452	1464 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	TNFAIP1	Q13829	316 aa		13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	TTLL12	Q14166	644 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	SPDYE2	Q495Y8	402 aa		13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	HSP90AB4P	Q58FF6	505 aa		13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	RGMB	Q6NW40	437 aa		13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	HHIPL2	Q6UWX4	724 aa		13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	TDRD3	Q9H7E2	651 aa	Known RBP	13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	ZNF70	Q9UC06	446 aa	Predicted RBP	13.64	□□□□□ -0.23
GGA1-222	ENST00000489772	UQCRFS1P1	P0C7P4	283 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	HSPA1A	P0DMV8	641 aa	Known RBP	13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	HSPA1B	P0DMV9	641 aa	Known RBP	13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	MAP2K2	P36507	400 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	MAP2K1	Q02750	393 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	SUPT20HL1	Q3ZLR7	823 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	CCDC158	Q5M9N0	1113 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	CCDC102A	Q96A19	550 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	AIDA	Q96BJ3	306 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	EXOC6B	Q9Y2D4	811 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	AOX1	Q06278	1338 aa		13.63	□□□□□ -0.23
GGA1-222	ENST00000489772	PRDX5	P30044	214 aa		13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	TNNI2	P48788	182 aa		13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	ZNF157	P51786	506 aa	Predicted RBP	13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	RASA3	Q14644	834 aa		13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	SPATA5	Q8NB90	893 aa		13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	TMOD2	Q9NZR1	351 aa		13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	ABCF2	Q9UG63	623 aa		13.62	□□□□□ -0.23
GGA1-222	ENST00000489772	AOC2	O75106	756 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	ARID4A	P29374	1257 aa	Predicted RBP	13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	NOG	Q13253	232 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	TTC39A	Q5SRH9	613 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	MOB2	Q70IA6	237 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	ARMC9	Q7Z3E5	817 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	DZIP1	Q86YF9	867 aa	Known RBP	13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	DBNDD2	Q9BQY9	259 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	HMG20B	Q9P0W2	317 aa		13.61	□□□□□ -0.23
GGA1-222	ENST00000489772	TCP10L2	B9ZVM9	353 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	UBE2Q2L	H0YL09	131 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	PPP1R12B	O60237	982 aa	Predicted RBP	13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	RRP1	P56182	461 aa	Known RBP	13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	PRKG1	Q13976	671 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	DIXDC1	Q155Q3	683 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	SLF2	Q8IX21	1173 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	SIRT2	Q8IXJ6	389 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	EAF2	Q96CJ1	260 aa	Predicted RBP	13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	BEGAIN	Q9BUH8	593 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	WBP1L	Q9NX94	342 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	TRPM7	Q96QT4	1865 aa		13.6	□□□□□ -0.23
GGA1-222	ENST00000489772	RAB11FIP3	O75154	756 aa		13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	MCAM	P43121	646 aa		13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	FKBP1C	Q5VVH2	108 aa		13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	ERICH6	Q7L0X2	663 aa		13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	RHPN1	Q8TCX5	695 aa		13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	ANGEL1	Q9UNK9	670 aa	Known RBP	13.59	□□□□□ -0.23
GGA1-222	ENST00000489772	DAGLA	Q9Y4D2	1042 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms