RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-212ENST00000489728 HHIPL2Q6UWX4 724 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 APOBEC3FQ8IUX4 373 aaKnown RBP13.56□□□□□ -0.24
CPSF7-212ENST00000489728 SULF1Q8IWU6 871 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 SLF2Q8IX21 1173 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 EXOC6Q8TAG9 804 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 ZDHHC15Q96MV8 337 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 CCDC8Q9H0W5 538 aaPredicted RBP13.56□□□□□ -0.24
CPSF7-212ENST00000489728 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
CPSF7-212ENST00000489728 TLR7Q9NYK1 1049 aaKnown RBP13.56□□□□□ -0.24
CPSF7-212ENST00000489728 TRPM7Q96QT4 1865 aa13.55□□□□□ -0.24
CPSF7-212ENST00000489728 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-212ENST00000489728 MCAMP43121 646 aa13.55□□□□□ -0.24
CPSF7-212ENST00000489728 CRKP46108 304 aa13.55□□□□□ -0.24
CPSF7-212ENST00000489728 KRT26Q7Z3Y9 468 aa13.55□□□□□ -0.24
CPSF7-212ENST00000489728 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
CPSF7-212ENST00000489728 PPP2R3BQ9Y5P8 575 aa13.55□□□□□ -0.24
CPSF7-212ENST00000489728 APBB1O00213 710 aa13.54□□□□□ -0.24
CPSF7-212ENST00000489728 PRDX5P30044 214 aa13.54□□□□□ -0.24
CPSF7-212ENST00000489728 NBPF9Q3BBW0 867 aa13.54□□□□□ -0.24
CPSF7-212ENST00000489728 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
CPSF7-212ENST00000489728 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
CPSF7-212ENST00000489728 GPATCH3Q96I76 525 aa13.54□□□□□ -0.24
CPSF7-212ENST00000489728 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
CPSF7-212ENST00000489728 GSTO1P78417 241 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 TNFAIP1Q13829 316 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 GRIK5Q16478 980 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 FKBP1CQ5VVH2 108 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 ERICH6Q7L0X2 663 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 DZIP1Q86YF9 867 aaKnown RBP13.53□□□□□ -0.24
CPSF7-212ENST00000489728 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 ABCF2Q9UG63 623 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 GAKO14976 1311 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 DOCK2Q92608 1830 aa13.53□□□□□ -0.24
CPSF7-212ENST00000489728 MAP4K4O95819 1239 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-212ENST00000489728 CENPBP07199 599 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-212ENST00000489728 ATP5JP18859 108 aa13.52□□□□□ -0.25
CPSF7-212ENST00000489728 TTF1Q15361 905 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-212ENST00000489728 SMC5Q8IY18 1101 aa13.52□□□□□ -0.25
CPSF7-212ENST00000489728 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-212ENST00000489728 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-212ENST00000489728 ZBTB47Q9UFB7 747 aaPredicted RBP13.52□□□□□ -0.25
CPSF7-212ENST00000489728 ASTN2O75129 1339 aaPredicted RBP13.51□□□□□ -0.25
CPSF7-212ENST00000489728 TMEM88BA6NKF7 163 aa13.51□□□□□ -0.25
CPSF7-212ENST00000489728 LDHCP07864 332 aa13.51□□□□□ -0.25
CPSF7-212ENST00000489728 PI16Q6UXB8 463 aa13.51□□□□□ -0.25
CPSF7-212ENST00000489728 LRP2BPQ9P2M1 347 aa13.51□□□□□ -0.25
CPSF7-212ENST00000489728 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
CPSF7-212ENST00000489728 MYH2Q9UKX2 1941 aa13.51□□□□□ -0.25
CPSF7-212ENST00000489728 MROH7-TTC4A0A0A0MT08 1334 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 TTC41PQ6P2S7 1318 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 TRAF5O00463 557 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 CYP2E1P05181 493 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-212ENST00000489728 ZAP70P43403 619 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 TNNI2P48788 182 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 FKBP1BP68106 108 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 MECOMQ03112 1051 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 APOBEC3HQ6NTF7 200 aaKnown RBP13.5□□□□□ -0.25
CPSF7-212ENST00000489728 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 NSUN4Q96CB9 384 aaKnown RBP13.5□□□□□ -0.25
CPSF7-212ENST00000489728 ECHDC1Q9NTX5 307 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 TMOD2Q9NZR1 351 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 ZNF70Q9UC06 446 aaPredicted RBP13.5□□□□□ -0.25
CPSF7-212ENST00000489728 DAGLAQ9Y4D2 1042 aa13.5□□□□□ -0.25
CPSF7-212ENST00000489728 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
CPSF7-212ENST00000489728 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 DIXDC1Q155Q3 683 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 FAM83AQ86UY5 434 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 CERS3Q8IU89 383 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 CDCA5Q96FF9 252 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 SNRKQ9NRH2 765 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 RAI14Q9P0K7 980 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 PCDHAC2Q9Y5I4 1007 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 PAPPA2Q9BXP8 1791 aa13.49□□□□□ -0.25
CPSF7-212ENST00000489728 GPR75-ASB3A0A0A6YYF3 556 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 ERC2O15083 957 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 SMARCA5O60264 1052 aaPredicted RBP13.48□□□□□ -0.25
CPSF7-212ENST00000489728 CELF2O95319 508 aaKnown RBP13.48□□□□□ -0.25
CPSF7-212ENST00000489728 NF2P35240 595 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 TBC1D9Q6ZT07 1266 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 HHIPL1Q96JK4 782 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 HAUS7Q99871 368 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 DEFB129Q9H1M3 183 aa13.48□□□□□ -0.25
CPSF7-212ENST00000489728 TDRD3Q9H7E2 651 aaKnown RBP13.48□□□□□ -0.25
CPSF7-212ENST00000489728 RFX7Q2KHR2 1363 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 CLRN2A0PK11 232 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
CPSF7-212ENST00000489728 PLCG2P16885 1265 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 CST9Q5W186 159 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 NAA16Q6N069 864 aaPredicted RBP13.47□□□□□ -0.25
CPSF7-212ENST00000489728 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 HOOK2Q96ED9 719 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 NOL10Q9BSC4 688 aaKnown RBP13.47□□□□□ -0.25
CPSF7-212ENST00000489728 VEZTQ9HBM0 779 aa13.47□□□□□ -0.25
CPSF7-212ENST00000489728 PIH1D3Q9NQM4 214 aaKnown RBP13.47□□□□□ -0.25
CPSF7-212ENST00000489728 PAG1Q9NWQ8 432 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms