RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
VTI1A-206ENST00000489142 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
VTI1A-206ENST00000489142 COPRSQ9NQ92 184 aa17.44■□□□□ 0.38
VTI1A-206ENST00000489142 ZNF70Q9UC06 446 aaPredicted RBP17.44■□□□□ 0.38
VTI1A-206ENST00000489142 SERPINA10Q9UK55 444 aa17.44■□□□□ 0.38
VTI1A-206ENST00000489142 ANGEL1Q9UNK9 670 aaKnown RBP17.44■□□□□ 0.38
VTI1A-206ENST00000489142 OTOFQ9HC10 1997 aa17.43■□□□□ 0.38
VTI1A-206ENST00000489142 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
VTI1A-206ENST00000489142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
VTI1A-206ENST00000489142 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 TCP10L2B9ZVM9 353 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 GNAI2P04899 355 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 RLBP1P12271 317 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 PHKA1P46020 1223 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 CACNB3P54284 484 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 RASA3Q14644 834 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 NBPF12Q5TAG4 269 aaPredicted RBP17.42■□□□□ 0.38
VTI1A-206ENST00000489142 ARMC9Q7Z3E5 817 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 CDAN1Q8IWY9 1227 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 TBC1D22AQ8WUA7 517 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
VTI1A-206ENST00000489142 TFCP2Q12800 502 aa17.41■□□□□ 0.38
VTI1A-206ENST00000489142 FTSJ3Q8IY81 847 aaKnown RBP17.41■□□□□ 0.38
VTI1A-206ENST00000489142 CSRNP1Q96S65 589 aa17.41■□□□□ 0.38
VTI1A-206ENST00000489142 CA12O43570 354 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 TRPA1O75762 1119 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 TIMM10P62072 90 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 MTX1Q13505 466 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 ITPRIPQ8IWB1 547 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 TEKT1Q969V4 418 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 CLMNQ96JQ2 1002 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 RNF186Q9NXI6 227 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 PPP2R3BQ9Y5P8 575 aa17.4■□□□□ 0.38
VTI1A-206ENST00000489142 TMEM39BQ9GZU3 492 aa17.39■□□□□ 0.37
VTI1A-206ENST00000489142 PRDX5P30044 214 aa17.38■□□□□ 0.37
VTI1A-206ENST00000489142 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
VTI1A-206ENST00000489142 CCDC102BQ68D86 513 aa17.38■□□□□ 0.37
VTI1A-206ENST00000489142 WDR66Q8TBY9 1149 aa17.38■□□□□ 0.37
VTI1A-206ENST00000489142 GNL3LQ9NVN8 582 aaKnown RBP17.38■□□□□ 0.37
VTI1A-206ENST00000489142 MYH2Q9UKX2 1941 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 A0A1B0GUL7 405 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 HDLBPQ00341 1268 aaKnown RBP17.37■□□□□ 0.37
VTI1A-206ENST00000489142 TNFAIP1Q13829 316 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 SUPT20HL1Q3ZLR7 823 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 LDLRAD1Q5T700 205 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 ZDHHC15Q96MV8 337 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 MAST3O60307 1309 aa17.37■□□□□ 0.37
VTI1A-206ENST00000489142 PPP1R12BO60237 982 aaPredicted RBP17.36■□□□□ 0.37
VTI1A-206ENST00000489142 APOBEC3HQ6NTF7 200 aaKnown RBP17.36■□□□□ 0.37
VTI1A-206ENST00000489142 TEPSINQ96N21 525 aa17.36■□□□□ 0.37
VTI1A-206ENST00000489142 NEUROD6Q96NK8 337 aa17.36■□□□□ 0.37
VTI1A-206ENST00000489142 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 USP2O75604 605 aaPredicted RBP17.35■□□□□ 0.37
VTI1A-206ENST00000489142 RASGRF1Q13972 1273 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 SPRYD7Q5W111 196 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 SAGE1Q9NXZ1 904 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 SUGT1Q9Y2Z0 365 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 DAGLAQ9Y4D2 1042 aa17.35■□□□□ 0.37
VTI1A-206ENST00000489142 LDHBP07195 334 aaKnown RBP17.34■□□□□ 0.37
VTI1A-206ENST00000489142 IREB2P48200 963 aaKnown RBP17.34■□□□□ 0.37
VTI1A-206ENST00000489142 TNNI2P48788 182 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 G3BP1Q13283 466 aaKnown RBP eCLIP17.34■□□□□ 0.37
VTI1A-206ENST00000489142 MAP3K11Q16584 847 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 HHIPL2Q6UWX4 724 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 SLC10A4Q96EP9 437 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 WNK4Q96J92 1243 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 TMOD2Q9NZR1 351 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
VTI1A-206ENST00000489142 LAMB1P07942 1786 aa17.33■□□□□ 0.37
VTI1A-206ENST00000489142 ZBTB7BO15156 539 aaPredicted RBP17.33■□□□□ 0.36
VTI1A-206ENST00000489142 POLA2Q14181 598 aa17.33■□□□□ 0.36
VTI1A-206ENST00000489142 PI16Q6UXB8 463 aa17.33■□□□□ 0.36
VTI1A-206ENST00000489142 SALL1Q9NSC2 1324 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 SEMA3EO15041 775 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 TBC1D8O95759 1140 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 GJA5P36382 358 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 ATP8B2P98198 1209 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 TCP10Q12799 353 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 OS9Q13438 667 aaPredicted RBP17.32■□□□□ 0.36
VTI1A-206ENST00000489142 MVPQ14764 893 aaKnown RBP17.32■□□□□ 0.36
VTI1A-206ENST00000489142 ABHD8Q96I13 439 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 MRIQ9BWK5 157 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 ELP3Q9H9T3 547 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 ABCF2Q9UG63 623 aa17.32■□□□□ 0.36
VTI1A-206ENST00000489142 TM4SF4P48230 202 aa17.31■□□□□ 0.36
VTI1A-206ENST00000489142 DGKZQ13574 1117 aa17.31■□□□□ 0.36
VTI1A-206ENST00000489142 GORABQ5T7V8 394 aa17.31■□□□□ 0.36
VTI1A-206ENST00000489142 CDC42EP5Q6NZY7 148 aa17.31■□□□□ 0.36
VTI1A-206ENST00000489142 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
VTI1A-206ENST00000489142 SSH3Q8TE77 659 aa17.31■□□□□ 0.36
VTI1A-206ENST00000489142 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
VTI1A-206ENST00000489142 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
VTI1A-206ENST00000489142 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
VTI1A-206ENST00000489142 NFIAQ12857 509 aa17.3■□□□□ 0.36
VTI1A-206ENST00000489142 DZIP1Q86YF9 867 aaKnown RBP17.3■□□□□ 0.36
VTI1A-206ENST00000489142 ANKRD13AQ8IZ07 590 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms