RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 IREB2P48200 963 aaKnown RBP6.91□□□□□ -1.3
SSR1-209ENST00000488834 DOC2BQ14184 412 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 ADGRE1Q14246 886 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 FBXO33Q7Z6M2 555 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 AGGF1Q8N302 714 aaeCLIP6.91□□□□□ -1.34e-23■□□□□ 10.7
SSR1-209ENST00000488834 WFDC12Q8WWY7 111 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 CORO1BQ9BR76 489 aa6.91□□□□□ -1.3
SSR1-209ENST00000488834 TTF2Q9UNY4 1162 aaKnown RBP6.91□□□□□ -1.3
SSR1-209ENST00000488834 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
SSR1-209ENST00000488834 F8W735 103 aaPredicted RBP6.9□□□□□ -1.3
SSR1-209ENST00000488834 ADAM11O75078 769 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 ALX3O95076 343 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 WISP1O95388 367 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 HP1BP3Q5SSJ5 553 aaPredicted RBP6.9□□□□□ -1.3
SSR1-209ENST00000488834 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
SSR1-209ENST00000488834 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
SSR1-209ENST00000488834 FAM161BQ96MY7 647 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 CEP44Q9C0F1 390 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 AK5Q9Y6K8 562 aa6.9□□□□□ -1.3
SSR1-209ENST00000488834 SORBS3O60504 671 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 MAOBP27338 520 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 HNRNPUQ00839 825 aaKnown RBP eCLIP6.89□□□□□ -1.31
SSR1-209ENST00000488834 FAAP100Q0VG06 881 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 AP3B2Q13367 1082 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 POU4F3Q15319 338 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 FDX2Q6P4F2 183 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 TMEM130Q8N3G9 435 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 CEP41Q9BYV8 373 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 RNF208Q9H0X6 261 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 RNF19AQ9NV58 838 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 VTI1BQ9UEU0 232 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 PPM1HQ9ULR3 514 aa6.89□□□□□ -1.31
SSR1-209ENST00000488834 SART1O43290 800 aaKnown RBP6.88□□□□□ -1.31
SSR1-209ENST00000488834 FBXO24O75426 580 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 NOS3P29474 1203 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 DAB2P98082 770 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 TAGLNQ01995 201 aaKnown RBP6.88□□□□□ -1.31
SSR1-209ENST00000488834 PDE3AQ14432 1141 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 TMC4Q7Z404 712 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 TPSG1Q9NRR2 321 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 SAMM50Q9Y512 469 aa6.88□□□□□ -1.31
SSR1-209ENST00000488834 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
SSR1-209ENST00000488834 TM4SF5O14894 197 aa6.87□□□□□ -1.31
SSR1-209ENST00000488834 KIAA1211Q6ZU35 1233 aa6.87□□□□□ -1.31
SSR1-209ENST00000488834 C3orf58Q8NDZ4 430 aa6.87□□□□□ -1.31
SSR1-209ENST00000488834 CBX8Q9HC52 389 aa6.87□□□□□ -1.31
SSR1-209ENST00000488834 RAD18Q9NS91 495 aa6.87□□□□□ -1.31
SSR1-209ENST00000488834 RSPO4Q2I0M5 234 aaPredicted RBP6.86□□□□□ -1.31
SSR1-209ENST00000488834 ANKRD34AQ69YU3 496 aa6.86□□□□□ -1.31
SSR1-209ENST00000488834 SULF2Q8IWU5 870 aa6.86□□□□□ -1.31
SSR1-209ENST00000488834 C12orf50Q8NA57 414 aaPredicted RBP6.86□□□□□ -1.31
SSR1-209ENST00000488834 TP53INP1Q96A56 240 aa6.86□□□□□ -1.31
SSR1-209ENST00000488834 ZC3H12CQ9C0D7 883 aaKnown RBP6.86□□□□□ -1.31
SSR1-209ENST00000488834 CYP4F12Q9HCS2 524 aa6.86□□□□□ -1.31
SSR1-209ENST00000488834 GAS2O43903 313 aaKnown RBP6.85□□□□□ -1.31
SSR1-209ENST00000488834 EXOSC6Q5RKV6 272 aaKnown RBP6.85□□□□□ -1.31
SSR1-209ENST00000488834 KCNB2Q92953 911 aa6.85□□□□□ -1.31
SSR1-209ENST00000488834 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
SSR1-209ENST00000488834 TRIM56Q9BRZ2 755 aaKnown RBP6.85□□□□□ -1.31
SSR1-209ENST00000488834 EMILIN2Q9BXX0 1053 aa6.85□□□□□ -1.31
SSR1-209ENST00000488834 PODXL2Q9NZ53 605 aa6.85□□□□□ -1.31
SSR1-209ENST00000488834 K7ELQ4 463 aaPredicted RBP6.84□□□□□ -1.31
SSR1-209ENST00000488834 LMNB1P20700 586 aa6.84□□□□□ -1.31
SSR1-209ENST00000488834 CCDC85BQ15834 202 aaPredicted RBP6.84□□□□□ -1.31
SSR1-209ENST00000488834 NKAPLQ5M9Q1 402 aa6.84□□□□□ -1.31
SSR1-209ENST00000488834 MEGF10Q96KG7 1140 aa6.84□□□□□ -1.31
SSR1-209ENST00000488834 MEGF11A6BM72 1044 aa6.83□□□□□ -1.32
SSR1-209ENST00000488834 GSTP1P09211 210 aaKnown RBP6.83□□□□□ -1.32
SSR1-209ENST00000488834 ZNF16P17020 682 aaPredicted RBP6.83□□□□□ -1.32
SSR1-209ENST00000488834 NME2P22392 152 aa6.83□□□□□ -1.32
SSR1-209ENST00000488834 AKAP4Q5JQC9 854 aa6.83□□□□□ -1.32
SSR1-209ENST00000488834 UTP4Q969X6 686 aaKnown RBP6.83□□□□□ -1.32
SSR1-209ENST00000488834 ACSBG1Q96GR2 724 aa6.83□□□□□ -1.32
SSR1-209ENST00000488834 CRELD1Q96HD1 420 aa6.83□□□□□ -1.32
SSR1-209ENST00000488834 NRSN2Q9GZP1 204 aa6.83□□□□□ -1.32
SSR1-209ENST00000488834 ECEL1O95672 775 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 DLGAP3O95886 979 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 CELA3AP09093 270 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 ARNTP27540 789 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 TAF1CQ15572 869 aaPredicted RBP6.82□□□□□ -1.32
SSR1-209ENST00000488834 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 MAP1SQ66K74 1059 aaPredicted RBP6.82□□□□□ -1.32
SSR1-209ENST00000488834 SV2BQ7L1I2 683 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 SSBP4Q9BWG4 385 aaPredicted RBP6.82□□□□□ -1.32
SSR1-209ENST00000488834 TMPRSS13Q9BYE2 586 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 AP4E1Q9UPM8 1137 aa6.82□□□□□ -1.32
SSR1-209ENST00000488834 ENC1O14682 589 aa6.81□□□□□ -1.32
SSR1-209ENST00000488834 SLFN14P0C7P3 912 aa6.81□□□□□ -1.32
SSR1-209ENST00000488834 USP11P51784 963 aa6.81□□□□□ -1.32
SSR1-209ENST00000488834 LRRC14Q15048 493 aa6.81□□□□□ -1.32
SSR1-209ENST00000488834 UVSSAQ2YD98 709 aa6.81□□□□□ -1.32
SSR1-209ENST00000488834 Q6ZS46 218 aa6.81□□□□□ -1.32
SSR1-209ENST00000488834 DZIP1LQ8IYY4 767 aaKnown RBP6.81□□□□□ -1.32
SSR1-209ENST00000488834 SMG8Q8ND04 991 aaKnown RBP6.81□□□□□ -1.32
SSR1-209ENST00000488834 UBL7Q96S82 380 aaPredicted RBP6.81□□□□□ -1.32
SSR1-209ENST00000488834 KCNF1Q9H3M0 494 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms