RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 AOX1Q06278 1338 aa23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 SHTN1A0MZ66 631 aa23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 F8W031 263 aaPredicted RBP23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 TTF1Q15361 905 aaPredicted RBP23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 TBC1D9Q6ZT07 1266 aa23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 USP50Q70EL3 339 aaPredicted RBP23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 PNMA8AQ86V59 439 aaPredicted RBP23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 MTMR14Q8NCE2 650 aa23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 MYOZ2Q9NPC6 264 aa23.59■■□□□ 1.37
PCOLCE-208ENST00000487172 PDE4AP27815 886 aa23.58■■□□□ 1.37
PCOLCE-208ENST00000487172 SERPINA10Q9UK55 444 aa23.58■■□□□ 1.37
PCOLCE-208ENST00000487172 TSHZ3Q63HK5 1081 aa23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 HHIPL2Q6UWX4 724 aa23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 DNAJC2Q99543 621 aaKnown RBP23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 ANTXR1Q9H6X2 564 aa23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 PAG1Q9NWQ8 432 aa23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 LRP2BPQ9P2M1 347 aa23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 NDUFB9Q9Y6M9 179 aa23.57■■□□□ 1.36
PCOLCE-208ENST00000487172 SAMD7Q7Z3H4 446 aa23.56■■□□□ 1.36
PCOLCE-208ENST00000487172 ZBED3Q96IU2 234 aaPredicted RBP23.56■■□□□ 1.36
PCOLCE-208ENST00000487172 PIH1D3Q9NQM4 214 aaKnown RBP23.56■■□□□ 1.36
PCOLCE-208ENST00000487172 DOCK2Q92608 1830 aa23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 GOLIM4O00461 696 aa23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 KIF3CO14782 793 aa23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 KIF4BQ2VIQ3 1234 aa23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 TMED8Q6PL24 325 aaPredicted RBP23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 TEKT1Q969V4 418 aa23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 FAM163AQ96GL9 167 aaPredicted RBP23.55■■□□□ 1.36
PCOLCE-208ENST00000487172 MYO5AQ9Y4I1 1855 aaKnown RBP23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 CRKP46108 304 aa23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 HIRAP54198 1017 aaPredicted RBP23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 MECOMQ03112 1051 aa23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 CFAP100Q494V2 611 aa23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 TBC1D10BQ4KMP7 808 aaPredicted RBP23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 SLF2Q8IX21 1173 aa23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 NSUN4Q96CB9 384 aaKnown RBP23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 RAI14Q9P0K7 980 aa23.54■■□□□ 1.36
PCOLCE-208ENST00000487172 WNT10BO00744 389 aa23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 EGFRP00533 1210 aa23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 MAP3K12Q12852 859 aa23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 DLGAP5Q15398 846 aa23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 RBM26Q5T8P6 1007 aaKnown RBP23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 DZIP1Q86YF9 867 aaKnown RBP23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 ZC3H15Q8WU90 426 aaKnown RBP23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 EDC3Q96F86 508 aaKnown RBP23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 PGAP2Q9UHJ9 254 aa23.53■■□□□ 1.36
PCOLCE-208ENST00000487172 IDH1O75874 414 aaKnown RBP23.52■■□□□ 1.36
PCOLCE-208ENST00000487172 LDHCP07864 332 aa23.52■■□□□ 1.36
PCOLCE-208ENST00000487172 GSTO1P78417 241 aa23.52■■□□□ 1.36
PCOLCE-208ENST00000487172 ZNF384Q8TF68 577 aa23.52■■□□□ 1.36
PCOLCE-208ENST00000487172 ZDHHC15Q96MV8 337 aa23.52■■□□□ 1.36
PCOLCE-208ENST00000487172 ADAMTSL1Q8N6G6 1762 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 SPDYE2BA6NHP3 402 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 SPDYE6P0CI01 402 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 DIXDC1Q155Q3 683 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 KBTBD3Q8NAB2 608 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 PRMT6Q96LA8 375 aaPredicted RBP23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 GAKO14976 1311 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 MYH2Q9UKX2 1941 aa23.51■■□□□ 1.35
PCOLCE-208ENST00000487172 MAST2Q6P0Q8 1798 aa23.5■■□□□ 1.35
PCOLCE-208ENST00000487172 RBM5P52756 815 aaKnown RBP eCLIP23.5■■□□□ 1.35
PCOLCE-208ENST00000487172 EAPPQ56P03 285 aaPredicted RBP23.5■■□□□ 1.35
PCOLCE-208ENST00000487172 LDHDQ86WU2 507 aa23.5■■□□□ 1.35
PCOLCE-208ENST00000487172 NBPF9Q3BBW0 867 aa23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 NAA16Q6N069 864 aaPredicted RBP23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 APOBEC3HQ6NTF7 200 aaKnown RBP23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 TICAM2Q86XR7 235 aa23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 DAGLAQ9Y4D2 1042 aa23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 PCDHAC2Q9Y5I4 1007 aa23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 MROH7-TTC4A0A0A0MT08 1334 aa23.49■■□□□ 1.35
PCOLCE-208ENST00000487172 EVI5LQ96CN4 794 aa23.48■■□□□ 1.35
PCOLCE-208ENST00000487172 ECM29Q5VYK3 1845 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 GPR75-ASB3A0A0A6YYF3 556 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 MYO1BO43795 1136 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 TOMM70O94826 608 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 MAP4K4O95819 1239 aaPredicted RBP23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 POTEIP0CG38 1075 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 POTEJP0CG39 1038 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 SLC9C2Q5TAH2 1124 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 ZSCAN25Q6NSZ9 544 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 MAGEB6Q8N7X4 407 aa23.47■■□□□ 1.35
PCOLCE-208ENST00000487172 ADD2P35612 726 aa23.46■■□□□ 1.35
PCOLCE-208ENST00000487172 LRRFIP1Q32MZ4 808 aaKnown RBP23.46■■□□□ 1.35
PCOLCE-208ENST00000487172 PITPNM2Q9BZ72 1349 aa23.46■■□□□ 1.35
PCOLCE-208ENST00000487172 CLEC11AQ9Y240 323 aa23.46■■□□□ 1.35
PCOLCE-208ENST00000487172 MYH7P12883 1935 aa23.45■■□□□ 1.35
PCOLCE-208ENST00000487172 PDE6AP16499 860 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 CYP7A1P22680 504 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 PPP4CP60510 307 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 UBE3CQ15386 1083 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 SPDYE2Q495Y8 402 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 TTC22Q5TAA0 569 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 CNTROBQ8N137 903 aa23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 RBM46Q8TBY0 533 aaKnown RBP23.45■■□□□ 1.34
PCOLCE-208ENST00000487172 TCRBV5S4A2TA0A5A2 114 aa23.44■■□□□ 1.34
PCOLCE-208ENST00000487172 ZFYP08048 801 aaPredicted RBP23.44■■□□□ 1.34
PCOLCE-208ENST00000487172 CHADLQ6NUI6 762 aa23.44■■□□□ 1.34
PCOLCE-208ENST00000487172 TDRD3Q9H7E2 651 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms