RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 SRRTQ9BXP5 876 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 SIL1Q9H173 461 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 AKAP2Q9Y2D5 859 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 FAN1Q9Y2M0 1017 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 HMGB1P09429 215 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 CEBPAP49715 358 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 SCRN1Q12765 414 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 MCM6Q14566 821 aa13.32□□□□□ -0.28
SEC61A1-205ENST00000483956 PRAMEF22A3QJZ6 481 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 NEURL1BA8MQ27 555 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 SCP2P22307 547 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 APOBRQ0VD83 1088 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 TRIM65Q6PJ69 517 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 THEMISQ8N1K5 641 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 OSBPL5Q9H0X9 879 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 DBNLQ9UJU6 430 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 C5P01031 1676 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 CYP21A2P08686 494 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 SKIDA1Q1XH10 827 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 CCAR1Q8IX12 1150 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 DHX40Q8IX18 779 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 NSUN7Q8NE18 718 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 ANO10Q9NW15 660 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 SLIT3O75094 1523 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 A0A087WUV0 522 aaPredicted RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 MAP2K7O14733 419 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 HSP90B1P14625 803 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 FAM160A1Q05DH4 1040 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 GCKRQ14397 625 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 TICAM2Q86XR7 235 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 ENGASEQ8NFI3 743 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 ABCC6O95255 1503 aa13.31□□□□□ -0.28
SEC61A1-205ENST00000483956 SH3TC1Q8TE82 1336 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 NEXNQ0ZGT2 675 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 MCMDC2Q4G0Z9 681 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 TNNI3KQ59H18 835 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 CCDC73Q6ZRK6 1079 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 FAM43BQ6ZT52 329 aaPredicted RBP13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 EDC3Q96F86 508 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 DDX11Q96FC9 970 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 AGXT2Q9BYV1 514 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 GOLPH3LQ9H4A5 285 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 FPGT-TNNI3KV9GXZ4 949 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 SALL1Q9NSC2 1324 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 KLHDC4Q8TBB5 520 aa13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 ZNF396Q96N95 335 aaPredicted RBP13.3□□□□□ -0.28
SEC61A1-205ENST00000483956 KINO60870 393 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 TUBB4AP04350 444 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 SFPQP23246 707 aaKnown RBP eCLIP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 HNRNPH1P31943 449 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 RFX5P48382 616 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 MAP2K1Q02750 393 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 EPHA10Q5JZY3 1008 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 KCNV1Q6PIU1 500 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 TMC6Q7Z403 805 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 FAM177A1Q8N128 213 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 HAUS7Q99871 368 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 LIG3P49916 1009 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 RIC3Q7Z5B4 369 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 PPP1R12AO14974 1030 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 FBXW10Q5XX13 1052 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 ISM2Q6H9L7 571 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 RSRC2Q7L4I2 434 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 DHX32Q7L7V1 743 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 CEP57L1Q8IYX8 460 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 AOPEPQ8N6M6 819 aa13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
SEC61A1-205ENST00000483956 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 PHACTR2O75167 634 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 ERLIN2O94905 339 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 CTDNEP1O95476 244 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 PPP2R3AQ06190 1150 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 AIMP1Q12904 312 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 NBPF20Q3BBV1 942 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 STOX1Q6ZVD7 989 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 CCDC150Q8NCX0 1101 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 NAT10Q9H0A0 1025 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 PTPDC1A2A3K4 754 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 PTPN12Q05209 780 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 CNNM3Q8NE01 707 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 USP28Q96RU2 1077 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 RAI14Q9P0K7 980 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 IMPACTQ9P2X3 320 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 SCN11AQ9UI33 1791 aa13.28□□□□□ -0.28
SEC61A1-205ENST00000483956 AFDNP55196 1824 aaKnown RBP13.27□□□□□ -0.28
SEC61A1-205ENST00000483956 TFCP2Q12800 502 aa13.27□□□□□ -0.28
SEC61A1-205ENST00000483956 ARHGEF25Q86VW2 580 aa13.27□□□□□ -0.28
SEC61A1-205ENST00000483956 PPFIA4O75335 1185 aa13.27□□□□□ -0.29
SEC61A1-205ENST00000483956 EXOSC10Q01780 885 aaKnown RBP13.27□□□□□ -0.29
SEC61A1-205ENST00000483956 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
SEC61A1-205ENST00000483956 KBTBD3Q8NAB2 608 aa13.27□□□□□ -0.29
SEC61A1-205ENST00000483956 BPIFA3Q9BQP9 254 aa13.27□□□□□ -0.29
SEC61A1-205ENST00000483956 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 KCNJ6P48051 423 aa13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 CEBPZQ03701 1054 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-205ENST00000483956 WWC2Q6AWC2 1192 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms