RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 DUOX1Q9NRD9 1551 aa31.13■■■□□ 2.57
SHOX2-204ENST00000483851 MBD4O95243 580 aa31.13■■■□□ 2.57
SHOX2-204ENST00000483851 CYP7A1P22680 504 aa31.13■■■□□ 2.57
SHOX2-204ENST00000483851 TTLL5Q6EMB2 1281 aa31.13■■■□□ 2.57
SHOX2-204ENST00000483851 WDR66Q8TBY9 1149 aa31.13■■■□□ 2.57
SHOX2-204ENST00000483851 TNPO1Q92973 898 aaKnown RBP31.13■■■□□ 2.57
SHOX2-204ENST00000483851 MAST2Q6P0Q8 1798 aa31.13■■■□□ 2.57
SHOX2-204ENST00000483851 UFL1O94874 794 aa31.12■■■□□ 2.57
SHOX2-204ENST00000483851 FBXL16Q8N461 479 aa31.12■■■□□ 2.57
SHOX2-204ENST00000483851 CCDC125Q86Z20 511 aa31.12■■■□□ 2.57
SHOX2-204ENST00000483851 TOB2Q14106 344 aaPredicted RBP31.11■■■□□ 2.57
SHOX2-204ENST00000483851 MSL1Q68DK7 614 aa31.11■■■□□ 2.57
SHOX2-204ENST00000483851 NACAP1Q9BZK3 213 aa31.11■■■□□ 2.57
SHOX2-204ENST00000483851 COL11A2P13942 1736 aaPredicted RBP31.11■■■□□ 2.57
SHOX2-204ENST00000483851 CCDC88AQ3V6T2 1871 aa31.11■■■□□ 2.57
SHOX2-204ENST00000483851 EXOSC10Q01780 885 aaKnown RBP31.1■■■□□ 2.57
SHOX2-204ENST00000483851 NAA16Q6N069 864 aaPredicted RBP31.1■■■□□ 2.57
SHOX2-204ENST00000483851 AGXT2Q9BYV1 514 aa31.1■■■□□ 2.57
SHOX2-204ENST00000483851 APPP05067 770 aa31.1■■■□□ 2.57
SHOX2-204ENST00000483851 CLEC17AQ6ZS10 378 aa31.1■■■□□ 2.57
SHOX2-204ENST00000483851 TBC1D16Q8TBP0 767 aa31.1■■■□□ 2.57
SHOX2-204ENST00000483851 KIAA1551Q9HCM1 1747 aa31.09■■■□□ 2.57
SHOX2-204ENST00000483851 IFNL3Q8IZI9 196 aa31.09■■■□□ 2.57
SHOX2-204ENST00000483851 NSUN4Q96CB9 384 aaKnown RBP31.09■■■□□ 2.57
SHOX2-204ENST00000483851 ARMT1Q9H993 441 aa31.09■■■□□ 2.57
SHOX2-204ENST00000483851 TPCN1Q9ULQ1 816 aa31.09■■■□□ 2.57
SHOX2-204ENST00000483851 WDR19Q8NEZ3 1342 aa31.09■■■□□ 2.57
SHOX2-204ENST00000483851 IL1R1P14778 569 aa31.08■■■□□ 2.57
SHOX2-204ENST00000483851 STYK1Q6J9G0 422 aa31.08■■■□□ 2.57
SHOX2-204ENST00000483851 MAGEB6P1A0A0J9YX57 407 aa31.08■■■□□ 2.57
SHOX2-204ENST00000483851 DDX11L8A8MPP1 907 aa31.08■■■□□ 2.57
SHOX2-204ENST00000483851 ME3Q16798 604 aa31.08■■■□□ 2.57
SHOX2-204ENST00000483851 GBP4Q96PP9 640 aa31.08■■■□□ 2.57
SHOX2-204ENST00000483851 TMX4Q9H1E5 349 aaPredicted RBP31.08■■■□□ 2.57
SHOX2-204ENST00000483851 GSG1L2A8MUP6 293 aa31.07■■■□□ 2.56
SHOX2-204ENST00000483851 COL9A3Q14050 684 aaPredicted RBP31.07■■■□□ 2.56
SHOX2-204ENST00000483851 LCORLQ8N3X6 602 aa31.07■■■□□ 2.56
SHOX2-204ENST00000483851 NCOA7Q8NI08 942 aa31.07■■■□□ 2.56
SHOX2-204ENST00000483851 NAPBQ9H115 298 aa31.07■■■□□ 2.56
SHOX2-204ENST00000483851 Q6ZUG5 572 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 SLC16A10Q8TF71 515 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 CD209Q9NNX6 404 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 POLLQ9UGP5 575 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 A0A0G2JLW4 131 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 H0YIN7 160 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 CHAF1AQ13111 956 aaPredicted RBP31.06■■■□□ 2.56
SHOX2-204ENST00000483851 RIOK1Q9BRS2 568 aaKnown RBP31.06■■■□□ 2.56
SHOX2-204ENST00000483851 SLC4A4Q9Y6R1 1079 aa31.06■■■□□ 2.56
SHOX2-204ENST00000483851 PDIA4P13667 645 aaKnown RBP31.05■■■□□ 2.56
SHOX2-204ENST00000483851 MECOMQ03112 1051 aa31.05■■■□□ 2.56
SHOX2-204ENST00000483851 LARGE1O95461 756 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 HAND2P61296 217 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 TRDNQ13061 729 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 DEFB132Q7Z7B7 95 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 ADGRA1Q86SQ6 560 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 TCEANC2Q96MN5 208 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 EPB41L4AQ9HCS5 686 aaPredicted RBP31.04■■■□□ 2.56
SHOX2-204ENST00000483851 MCM5P33992 734 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 GIMAP6Q6P9H5 292 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 RALYLQ86SE5 291 aaKnown RBP31.04■■■□□ 2.56
SHOX2-204ENST00000483851 C2CD5Q86YS7 1000 aa31.04■■■□□ 2.56
SHOX2-204ENST00000483851 TRAK2O60296 914 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 FGD1P98174 961 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 SLC51AQ86UW1 340 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 MIGA1Q8NAN2 632 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 ZNF384Q8TF68 577 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 CHMP4CQ96CF2 233 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 LARP6Q9BRS8 491 aaKnown RBP31.03■■■□□ 2.56
SHOX2-204ENST00000483851 SMC3Q9UQE7 1217 aa31.03■■■□□ 2.56
SHOX2-204ENST00000483851 C6orf229H3BNL8 230 aa31.02■■■□□ 2.56
SHOX2-204ENST00000483851 MB21D2Q8IYB1 491 aaPredicted RBP31.02■■■□□ 2.56
SHOX2-204ENST00000483851 MPNDQ8N594 471 aa31.02■■■□□ 2.56
SHOX2-204ENST00000483851 TIAM2Q8IVF5 1701 aa31.02■■■□□ 2.56
SHOX2-204ENST00000483851 CCDC83Q8IWF9 413 aa31.01■■■□□ 2.56
SHOX2-204ENST00000483851 LDHBP07195 334 aaKnown RBP31.01■■■□□ 2.55
SHOX2-204ENST00000483851 PRDX5P30044 214 aa31.01■■■□□ 2.55
SHOX2-204ENST00000483851 GSTO1P78417 241 aa31.01■■■□□ 2.55
SHOX2-204ENST00000483851 EVCP57679 992 aa31■■■□□ 2.55
SHOX2-204ENST00000483851 TBC1D22AQ8WUA7 517 aa31■■■□□ 2.55
SHOX2-204ENST00000483851 COA1Q9GZY4 146 aa31■■■□□ 2.55
SHOX2-204ENST00000483851 NBPF3Q9H094 633 aa31■■■□□ 2.55
SHOX2-204ENST00000483851 PTMSP20962 102 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 TDO2P48775 406 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 DZIP1Q86YF9 867 aaKnown RBP30.99■■■□□ 2.55
SHOX2-204ENST00000483851 BRF1Q92994 677 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 CNKSR1Q969H4 720 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 CNNM2Q9H8M5 875 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 BRD1O95696 1058 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 CERS3Q8IU89 383 aa30.99■■■□□ 2.55
SHOX2-204ENST00000483851 FAM205AQ6ZU69 1335 aa30.98■■■□□ 2.55
SHOX2-204ENST00000483851 PRKAB2O43741 272 aa30.98■■■□□ 2.55
SHOX2-204ENST00000483851 DPP8Q6V1X1 898 aaPredicted RBP30.98■■■□□ 2.55
SHOX2-204ENST00000483851 ZNF622Q969S3 477 aaKnown RBP eCLIP30.98■■■□□ 2.55
SHOX2-204ENST00000483851 GPR101Q96P66 508 aaPredicted RBP30.98■■■□□ 2.55
SHOX2-204ENST00000483851 CHD4Q14839 1912 aa30.98■■■□□ 2.55
SHOX2-204ENST00000483851 ST3GAL1Q11201 340 aa30.97■■■□□ 2.55
SHOX2-204ENST00000483851 TBC1D10CQ8IV04 446 aa30.97■■■□□ 2.55
SHOX2-204ENST00000483851 ZNF274Q96GC6 653 aaPredicted RBP30.97■■■□□ 2.55
SHOX2-204ENST00000483851 ZDHHC9Q9Y397 364 aa30.97■■■□□ 2.55
SHOX2-204ENST00000483851 LDHCP07864 332 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms