RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 NECAB3Q96P71 396 aaPredicted RBP7.43□□□□□ -1.22
COPA-203ENST00000481040 LRRC3Q9BY71 257 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 RUBCNLQ9H714 662 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 ST7Q9NRC1 585 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 DZANK1Q9NVP4 752 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 CNTNAP5Q8WYK1 1306 aa7.43□□□□□ -1.22
COPA-203ENST00000481040 TLR3O15455 904 aaKnown RBP7.42□□□□□ -1.22
COPA-203ENST00000481040 PDPK1O15530 556 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 KIF4AO95239 1232 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 PARNO95453 639 aaKnown RBP7.42□□□□□ -1.22
COPA-203ENST00000481040 ITGB2P05107 769 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 BCRP11274 1271 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 ACPPP15309 386 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 MX2P20592 715 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 ITPKAP23677 461 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 GRIA4P48058 902 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 RPS26P62854 115 aaKnown RBP7.42□□□□□ -1.22
COPA-203ENST00000481040 CCDC181Q5TID7 509 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 C1orf229Q6ZS94 237 aaPredicted RBP7.42□□□□□ -1.22
COPA-203ENST00000481040 KIAA0907Q7Z7F0 614 aaPredicted RBP7.42□□□□□ -1.22
COPA-203ENST00000481040 NLRP8Q86W28 1048 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 NCAPG2Q86XI2 1143 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 TRIM42Q8IWZ5 723 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 CRBNQ96SW2 442 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 GSX2Q9BZM3 304 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 ACTR10Q9NZ32 417 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 HCN2Q9UL51 889 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 PPME1Q9Y570 386 aa7.42□□□□□ -1.22
COPA-203ENST00000481040 F13A1P00488 732 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 RARAP10276 462 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 GYS2P54840 703 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 AMPD3Q01432 767 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 RASGRF1Q13972 1273 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 SPRED3Q2MJR0 410 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 PLEKHG6Q3KR16 790 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 COL13A1Q5TAT6 717 aaPredicted RBP7.41□□□□□ -1.22
COPA-203ENST00000481040 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 BNC2Q6ZN30 1099 aaPredicted RBP7.41□□□□□ -1.22
COPA-203ENST00000481040 CCDC84Q86UT8 332 aaPredicted RBP7.41□□□□□ -1.22
COPA-203ENST00000481040 FERD3LQ96RJ6 166 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 SEC31BQ9NQW1 1179 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 TMEM260Q9NX78 707 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 ZFATQ9P243 1243 aa7.41□□□□□ -1.22
COPA-203ENST00000481040 PAGE1O75459 146 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 TRPA1O75762 1119 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 MCM4P33991 863 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 SFSWAPQ12872 951 aaKnown RBP7.4□□□□□ -1.22
COPA-203ENST00000481040 HYAL2Q12891 473 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 PGBD3Q8N328 593 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 OR6P1Q8NGX9 317 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 GATAD2BQ8WXI9 593 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 SCARF2Q96GP6 870 aaPredicted RBP7.4□□□□□ -1.22
COPA-203ENST00000481040 TRERF1Q96PN7 1200 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 IRF2BPLQ9H1B7 796 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 DDX56Q9NY93 547 aaKnown RBP7.4□□□□□ -1.22
COPA-203ENST00000481040 MAPK8IP1Q9UQF2 711 aa7.4□□□□□ -1.22
COPA-203ENST00000481040 METTL12A8MUP2 240 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 SHISA8B8ZZ34 492 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 C2CD2LO14523 706 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 TRIM37O94972 964 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 PSAPP07602 524 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 LMNB1P20700 586 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 ZNF165P49910 485 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 SQSTM1Q13501 440 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 MPP2Q14168 576 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 CWF19L2Q2TBE0 894 aaKnown RBP7.39□□□□□ -1.23
COPA-203ENST00000481040 RPS26P11Q5JNZ5 115 aaPredicted RBP7.39□□□□□ -1.23
COPA-203ENST00000481040 GPAT2Q6NUI2 795 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 C16orf86Q6ZW13 317 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 CEP120Q8N960 986 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 PLD4Q96BZ4 506 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 MIR1-1HGQ9H1L0 117 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 NDFIP2Q9NV92 336 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 TLR7Q9NYK1 1049 aaKnown RBP7.39□□□□□ -1.23
COPA-203ENST00000481040 SUGT1Q9Y2Z0 365 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 PCDHB5Q9Y5E4 795 aa7.39□□□□□ -1.23
COPA-203ENST00000481040 A0A096LPE4 126 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 A0A1W2PPZ6 126 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 FAM221AA4D161 298 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 OIP5O43482 229 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 SOX18P35713 384 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 SNRPNP63162 240 aaKnown RBP7.38□□□□□ -1.23
COPA-203ENST00000481040 FAAP100Q0VG06 881 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 SEPT6Q14141 434 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 FXNQ16595 210 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 TAF7LQ5H9L4 462 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 KANK3Q6NY19 840 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 STAG1Q8WVM7 1258 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 JARID2Q92833 1246 aaPredicted RBP7.38□□□□□ -1.23
COPA-203ENST00000481040 FEZ1Q99689 392 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 BHLHE41Q9C0J9 482 aaPredicted RBP7.38□□□□□ -1.23
COPA-203ENST00000481040 ZNF576Q9H609 170 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 GPN3Q9UHW5 284 aaPredicted RBP7.38□□□□□ -1.23
COPA-203ENST00000481040 LEMD3Q9Y2U8 911 aa7.38□□□□□ -1.23
COPA-203ENST00000481040 EFSO43281 561 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 FAM157BP0CG42 384 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 MASP1P48740 699 aa7.37□□□□□ -1.23
COPA-203ENST00000481040 C2orf27AQ580R0 203 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms