RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
ATG4B-219ENST00000479941 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-219ENST00000479941 ABCF2Q9UG63 623 aa13.24□□□□□ -0.29
ATG4B-219ENST00000479941 PITPNM2Q9BZ72 1349 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 MYO1BO43795 1136 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 ITGBL1O95965 494 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-219ENST00000479941 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 PRDX5P30044 214 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 CRKP46108 304 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 HHIPL2Q6UWX4 724 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 PI16Q6UXB8 463 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 CDC37L1Q7L3B6 337 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 SMC5Q8IY18 1101 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
ATG4B-219ENST00000479941 IGHDP01880 384 aa13.22□□□□□ -0.29
ATG4B-219ENST00000479941 ANGEL2Q5VTE6 544 aaKnown RBP13.22□□□□□ -0.29
ATG4B-219ENST00000479941 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
ATG4B-219ENST00000479941 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
ATG4B-219ENST00000479941 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
ATG4B-219ENST00000479941 SNRKQ9NRH2 765 aa13.22□□□□□ -0.29
ATG4B-219ENST00000479941 GGA3Q9NZ52 723 aa13.22□□□□□ -0.29
ATG4B-219ENST00000479941 PASKQ96RG2 1323 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 CYP2E1P05181 493 aaPredicted RBP13.21□□□□□ -0.29
ATG4B-219ENST00000479941 ATP5JP18859 108 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 ZAP70P43403 619 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 ANKRD45Q5TZF3 282 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 TBC1D9Q6ZT07 1266 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 KRT26Q7Z3Y9 468 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 DZIP1Q86YF9 867 aaKnown RBP13.21□□□□□ -0.29
ATG4B-219ENST00000479941 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 GPATCH3Q96I76 525 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 ZDHHC15Q96MV8 337 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 LRP2BPQ9P2M1 347 aa13.21□□□□□ -0.29
ATG4B-219ENST00000479941 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-219ENST00000479941 AKAP11Q9UKA4 1901 aa13.2□□□□□ -0.3
ATG4B-219ENST00000479941 APOBEC3FQ8IUX4 373 aaKnown RBP13.2□□□□□ -0.3
ATG4B-219ENST00000479941 NSUN4Q96CB9 384 aaKnown RBP13.2□□□□□ -0.3
ATG4B-219ENST00000479941 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
ATG4B-219ENST00000479941 ECHDC1Q9NTX5 307 aa13.2□□□□□ -0.3
ATG4B-219ENST00000479941 RAI14Q9P0K7 980 aa13.2□□□□□ -0.3
ATG4B-219ENST00000479941 PCDHAC2Q9Y5I4 1007 aa13.2□□□□□ -0.3
ATG4B-219ENST00000479941 CEP350Q5VT06 3117 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 NEFLP07196 543 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 HSPA6P17066 643 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 APLP1P51693 650 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 GSTO1P78417 241 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 MECOMQ03112 1051 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 TTF1Q15361 905 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-219ENST00000479941 DIXDC1Q155Q3 683 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
ATG4B-219ENST00000479941 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-219ENST00000479941 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
ATG4B-219ENST00000479941 FAM163AQ96GL9 167 aaPredicted RBP13.19□□□□□ -0.3
ATG4B-219ENST00000479941 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 LDHCP07864 332 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 TNFAIP1Q13829 316 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 TDRD3Q9H7E2 651 aaKnown RBP13.18□□□□□ -0.3
ATG4B-219ENST00000479941 ZNF70Q9UC06 446 aaPredicted RBP13.18□□□□□ -0.3
ATG4B-219ENST00000479941 DAGLAQ9Y4D2 1042 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 NDUFB9Q9Y6M9 179 aa13.18□□□□□ -0.3
ATG4B-219ENST00000479941 GAKO14976 1311 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 CLRN2A0PK11 232 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 ADM5C9JUS6 153 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 TRAF5O00463 557 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 ERC2O15083 957 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 MX1P20591 662 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 NUCB1Q02818 461 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 NAA16Q6N069 864 aaPredicted RBP13.17□□□□□ -0.3
ATG4B-219ENST00000479941 CHD1LQ86WJ1 897 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 DNAJC2Q99543 621 aaKnown RBP13.17□□□□□ -0.3
ATG4B-219ENST00000479941 HAUS7Q99871 368 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 ANTXR1Q9H6X2 564 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 VEZTQ9HBM0 779 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 PIH1D3Q9NQM4 214 aaKnown RBP13.17□□□□□ -0.3
ATG4B-219ENST00000479941 PAG1Q9NWQ8 432 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 TMOD2Q9NZR1 351 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 PPP2R3BQ9Y5P8 575 aa13.17□□□□□ -0.3
ATG4B-219ENST00000479941 MROH7-TTC4A0A0A0MT08 1334 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 AOX1Q06278 1338 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 POLR2AP24928 1970 aaKnown RBP13.16□□□□□ -0.3
ATG4B-219ENST00000479941 GPR75-ASB3A0A0A6YYF3 556 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 TMEM88BA6NKF7 163 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 GOLIM4O00461 696 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 IDH1O75874 414 aaKnown RBP13.16□□□□□ -0.3
ATG4B-219ENST00000479941 TNNI2P48788 182 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 ZNF384Q8TF68 577 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 LNPKQ9C0E8 428 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 DEFB129Q9H1M3 183 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 ECM29Q5VYK3 1845 aa13.16□□□□□ -0.3
ATG4B-219ENST00000479941 SALL3Q9BXA9 1300 aa13.15□□□□□ -0.3
ATG4B-219ENST00000479941 GLRX3O76003 335 aaKnown RBP13.15□□□□□ -0.3
ATG4B-219ENST00000479941 CELF2O95319 508 aaKnown RBP13.15□□□□□ -0.3
ATG4B-219ENST00000479941 MAP4K4O95819 1239 aaPredicted RBP13.15□□□□□ -0.3
ATG4B-219ENST00000479941 BTDP43251 543 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms