RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 ZBTB22O15209 634 aa19.21■□□□□ 0.67
HMGA1-206ENST00000478214 MYO1BO43795 1136 aa19.21■□□□□ 0.67
HMGA1-206ENST00000478214 ARAP2Q8WZ64 1704 aa19.21■□□□□ 0.67
HMGA1-206ENST00000478214 PRDX5P30044 214 aa19.2■□□□□ 0.66
HMGA1-206ENST00000478214 HDLBPQ00341 1268 aaKnown RBP19.2■□□□□ 0.66
HMGA1-206ENST00000478214 PAXIP1Q6ZW49 1069 aaPredicted RBP19.2■□□□□ 0.66
HMGA1-206ENST00000478214 C2orf69Q8N8R5 385 aa19.2■□□□□ 0.66
HMGA1-206ENST00000478214 TEKT1Q969V4 418 aa19.2■□□□□ 0.66
HMGA1-206ENST00000478214 TDRD3Q9H7E2 651 aaKnown RBP19.2■□□□□ 0.66
HMGA1-206ENST00000478214 VEZTQ9HBM0 779 aa19.2■□□□□ 0.66
HMGA1-206ENST00000478214 HMMRO75330 724 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 HUNKP57058 714 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 CYP4F22Q6NT55 531 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 DBNDD2Q9BQY9 259 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 MRIQ9BWK5 157 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 DEFB129Q9H1M3 183 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 ZNF70Q9UC06 446 aaPredicted RBP19.19■□□□□ 0.66
HMGA1-206ENST00000478214 MAST3O60307 1309 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 SALL1Q9NSC2 1324 aa19.19■□□□□ 0.66
HMGA1-206ENST00000478214 LDHBP07195 334 aaKnown RBP19.18■□□□□ 0.66
HMGA1-206ENST00000478214 GRM1Q13255 1194 aa19.18■□□□□ 0.66
HMGA1-206ENST00000478214 SPDYE2Q495Y8 402 aa19.18■□□□□ 0.66
HMGA1-206ENST00000478214 PI16Q6UXB8 463 aa19.18■□□□□ 0.66
HMGA1-206ENST00000478214 ERC1Q8IUD2 1116 aa19.18■□□□□ 0.66
HMGA1-206ENST00000478214 EAF2Q96CJ1 260 aaPredicted RBP19.18■□□□□ 0.66
HMGA1-206ENST00000478214 CAPNS2Q96L46 248 aa19.18■□□□□ 0.66
HMGA1-206ENST00000478214 HMG20BQ9P0W2 317 aa19.18■□□□□ 0.66
HMGA1-206ENST00000478214 PDS5AQ29RF7 1337 aaKnown RBP19.18■□□□□ 0.66
HMGA1-206ENST00000478214 WDR33Q9C0J8 1336 aaKnown RBP19.18■□□□□ 0.66
HMGA1-206ENST00000478214 ARID4AP29374 1257 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-206ENST00000478214 DIXDC1Q155Q3 683 aa19.17■□□□□ 0.66
HMGA1-206ENST00000478214 HSP90AB4PQ58FF6 505 aa19.17■□□□□ 0.66
HMGA1-206ENST00000478214 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
HMGA1-206ENST00000478214 ZDHHC15Q96MV8 337 aa19.17■□□□□ 0.66
HMGA1-206ENST00000478214 CCDC8Q9H0W5 538 aaPredicted RBP19.17■□□□□ 0.66
HMGA1-206ENST00000478214 TLR7Q9NYK1 1049 aaKnown RBP19.17■□□□□ 0.66
HMGA1-206ENST00000478214 APBB1O00213 710 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 MCAMP43121 646 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 HHIPL2Q6UWX4 724 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 MOB2Q70IA6 237 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 ZGPATQ8N5A5 531 aaKnown RBP19.16■□□□□ 0.66
HMGA1-206ENST00000478214 SPATA5Q8NB90 893 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 RHPN1Q8TCX5 695 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 HHIPL1Q96JK4 782 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 ABCF2Q9UG63 623 aa19.16■□□□□ 0.66
HMGA1-206ENST00000478214 DBNLQ9UJU6 430 aaKnown RBP19.16■□□□□ 0.66
HMGA1-206ENST00000478214 UQCRFS1P1P0C7P4 283 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 ECE1P42892 770 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 RASA3Q14644 834 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 CCDC158Q5M9N0 1113 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 TTC39AQ5SRH9 613 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 IL1RAPL2Q9NP60 686 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 PPP2R3BQ9Y5P8 575 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 MYH13Q9UKX3 1938 aa19.15■□□□□ 0.66
HMGA1-206ENST00000478214 TCP10L2B9ZVM9 353 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 NF2P35240 595 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 CACNB3P54284 484 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 FKBP1BP68106 108 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 TBC1D9Q6ZT07 1266 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 AACSQ86V21 672 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 SNRKQ9NRH2 765 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 DAGLAQ9Y4D2 1042 aa19.14■□□□□ 0.65
HMGA1-206ENST00000478214 AOC2O75106 756 aa19.13■□□□□ 0.65
HMGA1-206ENST00000478214 PRKG1Q13976 671 aa19.13■□□□□ 0.65
HMGA1-206ENST00000478214 TTLL12Q14166 644 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-206ENST00000478214 SPTY2D1Q68D10 685 aaPredicted RBP19.13■□□□□ 0.65
HMGA1-206ENST00000478214 RGMBQ6NW40 437 aa19.13■□□□□ 0.65
HMGA1-206ENST00000478214 KIF1BPQ96EK5 621 aa19.13■□□□□ 0.65
HMGA1-206ENST00000478214 CRBNQ96SW2 442 aa19.13■□□□□ 0.65
HMGA1-206ENST00000478214 UBE2Q2LH0YL09 131 aa19.12■□□□□ 0.65
HMGA1-206ENST00000478214 RAB11FIP3O75154 756 aa19.12■□□□□ 0.65
HMGA1-206ENST00000478214 TNFAIP1Q13829 316 aa19.12■□□□□ 0.65
HMGA1-206ENST00000478214 NBPF12Q5TAG4 269 aaPredicted RBP19.12■□□□□ 0.65
HMGA1-206ENST00000478214 DZIP1Q86YF9 867 aaKnown RBP19.12■□□□□ 0.65
HMGA1-206ENST00000478214 HSPA1AP0DMV8 641 aaKnown RBP19.11■□□□□ 0.65
HMGA1-206ENST00000478214 HSPA1BP0DMV9 641 aaKnown RBP19.11■□□□□ 0.65
HMGA1-206ENST00000478214 ZNF157P51786 506 aaPredicted RBP19.11■□□□□ 0.65
HMGA1-206ENST00000478214 ERICH6Q7L0X2 663 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 ZNF512BQ96KM6 892 aaPredicted RBP19.11■□□□□ 0.65
HMGA1-206ENST00000478214 TMEM39BQ9GZU3 492 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 BCL11AQ9H165 835 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 TMOD2Q9NZR1 351 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 FZD1Q9UP38 647 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 PCDHB15Q9Y5E8 787 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 PAPPA2Q9BXP8 1791 aa19.11■□□□□ 0.65
HMGA1-206ENST00000478214 SSC5DA1L4H1 1573 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 TNNI2P48788 182 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 MECOMQ03112 1051 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 SUPT20HL1Q3ZLR7 823 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 CDC42EP5Q6NZY7 148 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 CDAN1Q8IWY9 1227 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 CLASRPQ8N2M8 674 aaKnown RBP19.1■□□□□ 0.65
HMGA1-206ENST00000478214 ZNF384Q8TF68 577 aa19.1■□□□□ 0.65
HMGA1-206ENST00000478214 GAKO14976 1311 aa19.09■□□□□ 0.65
HMGA1-206ENST00000478214 FAM155AB1AL88 458 aaPredicted RBP19.09■□□□□ 0.65
HMGA1-206ENST00000478214 ZAP70P43403 619 aa19.09■□□□□ 0.65
HMGA1-206ENST00000478214 FKBP1CQ5VVH2 108 aa19.09■□□□□ 0.65
HMGA1-206ENST00000478214 ARMC9Q7Z3E5 817 aa19.09■□□□□ 0.65
HMGA1-206ENST00000478214 TEPSINQ96N21 525 aa19.09■□□□□ 0.65
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