RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SUGCTQ9HAC7 445 aa7.99□□□□□ -1.13
UBR3-209ENST00000477461 HIF3AQ9Y2N7 669 aa7.99□□□□□ -1.13
UBR3-209ENST00000477461 FAM95CA0A1B0GW59 222 aa7.98□□□□□ -1.13
UBR3-209ENST00000477461 HOXA10P31260 410 aaPredicted RBP7.98□□□□□ -1.13
UBR3-209ENST00000477461 GRIK1P39086 918 aa7.98□□□□□ -1.13
UBR3-209ENST00000477461 ZNF157P51786 506 aaPredicted RBP7.98□□□□□ -1.13
UBR3-209ENST00000477461 SOX4Q06945 474 aaPredicted RBP7.98□□□□□ -1.13
UBR3-209ENST00000477461 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
UBR3-209ENST00000477461 AKAP4Q5JQC9 854 aa7.98□□□□□ -1.13
UBR3-209ENST00000477461 KIAA0319Q5VV43 1072 aa7.98□□□□□ -1.13
UBR3-209ENST00000477461 C2CD4AQ8NCU7 369 aaPredicted RBP7.98□□□□□ -1.13
UBR3-209ENST00000477461 RAD18Q9NS91 495 aa7.98□□□□□ -1.13
UBR3-209ENST00000477461 EIF1AYO14602 144 aaKnown RBP7.97□□□□□ -1.13
UBR3-209ENST00000477461 GADD45BO75293 160 aaPredicted RBP7.97□□□□□ -1.13
UBR3-209ENST00000477461 F13BP05160 661 aa7.97□□□□□ -1.13
UBR3-209ENST00000477461 CCDC74AQ96AQ1 378 aa7.97□□□□□ -1.13
UBR3-209ENST00000477461 FAM129BQ96TA1 746 aa7.97□□□□□ -1.13
UBR3-209ENST00000477461 NRSN2Q9GZP1 204 aa7.97□□□□□ -1.13
UBR3-209ENST00000477461 ATG3Q9NT62 314 aa7.97□□□□□ -1.13
UBR3-209ENST00000477461 GPR182O15218 404 aa7.96□□□□□ -1.14
UBR3-209ENST00000477461 CYP11A1P05108 521 aa7.96□□□□□ -1.14
UBR3-209ENST00000477461 INTS5Q6P9B9 1019 aaKnown RBP7.96□□□□□ -1.14
UBR3-209ENST00000477461 PAOXQ6QHF9 649 aa7.96□□□□□ -1.14
UBR3-209ENST00000477461 DYMQ7RTS9 669 aa7.96□□□□□ -1.14
UBR3-209ENST00000477461 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
UBR3-209ENST00000477461 OAS3Q9Y6K5 1087 aaKnown RBP7.96□□□□□ -1.14
UBR3-209ENST00000477461 KIAA1324LA8MWY0 1029 aaPredicted RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 RAB6AP20340 208 aa7.95□□□□□ -1.14
UBR3-209ENST00000477461 ADMP35318 185 aa7.95□□□□□ -1.14
UBR3-209ENST00000477461 GP2P55259 537 aaKnown RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 CCER1Q8TC90 406 aaPredicted RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 EPS8L3Q8TE67 593 aaKnown RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 TRIM56Q9BRZ2 755 aaKnown RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 ZC3H12CQ9C0D7 883 aaKnown RBP7.95□□□□□ -1.14
UBR3-209ENST00000477461 LGR6Q9HBX8 967 aa7.95□□□□□ -1.14
UBR3-209ENST00000477461 NFICP08651 508 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 ADH5P11766 374 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 TBC1D32Q96NH3 1257 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 CORO1BQ9BR76 489 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 OSBPL1AQ9BXW6 950 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 ZNF576Q9H609 170 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 BIN2Q9UBW5 565 aaPredicted RBP7.94□□□□□ -1.14
UBR3-209ENST00000477461 LEMD3Q9Y2U8 911 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 ACTL7BQ9Y614 415 aa7.94□□□□□ -1.14
UBR3-209ENST00000477461 B3GALT4O96024 378 aa7.93□□□□□ -1.14
UBR3-209ENST00000477461 SPINK2P20155 84 aa7.93□□□□□ -1.14
UBR3-209ENST00000477461 PDE3AQ14432 1141 aa7.93□□□□□ -1.14
UBR3-209ENST00000477461 GIMAP7Q8NHV1 300 aa7.93□□□□□ -1.14
UBR3-209ENST00000477461 DDX54Q8TDD1 881 aaKnown RBP7.93□□□□□ -1.14
UBR3-209ENST00000477461 CITED4Q96RK1 184 aa7.93□□□□□ -1.14
UBR3-209ENST00000477461 AP4E1Q9UPM8 1137 aa7.93□□□□□ -1.14
UBR3-209ENST00000477461 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 IGHA2P01877 340 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 ITPKAP23677 461 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 IRAK1P51617 712 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 PI16Q6UXB8 463 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 DTX1Q86Y01 620 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 CSRNP1Q96S65 589 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 ABCB6Q9NP58 842 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 TIMELESSQ9UNS1 1208 aa7.92□□□□□ -1.14
UBR3-209ENST00000477461 TMEM238LA0A1B0GVL6 79 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 FAM170BA6NMN3 283 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 WNT11O96014 354 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 LIG1P18858 919 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 ASPAP45381 313 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 GRM2Q14416 872 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 MCTP1Q6DN14 999 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 FAM105AQ9NUU6 356 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 PRKAG2Q9UGJ0 569 aa7.91□□□□□ -1.14
UBR3-209ENST00000477461 SOWAHDA6NJG2 315 aa7.9□□□□□ -1.14
UBR3-209ENST00000477461 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
UBR3-209ENST00000477461 AOC2O75106 756 aa7.9□□□□□ -1.14
UBR3-209ENST00000477461 FAAP100Q0VG06 881 aa7.9□□□□□ -1.14
UBR3-209ENST00000477461 YIPF2Q9BWQ6 316 aa7.9□□□□□ -1.14
UBR3-209ENST00000477461 DNAJC25Q9H1X3 360 aa7.9□□□□□ -1.14
UBR3-209ENST00000477461 FCGRTP55899 365 aa7.89□□□□□ -1.15
UBR3-209ENST00000477461 PDE4CQ08493 712 aa7.89□□□□□ -1.15
UBR3-209ENST00000477461 ZAR1Q86SH2 424 aa7.89□□□□□ -1.15
UBR3-209ENST00000477461 GLIS3Q8NEA6 775 aa7.89□□□□□ -1.15
UBR3-209ENST00000477461 EZH1Q92800 747 aaPredicted RBP7.89□□□□□ -1.15
UBR3-209ENST00000477461 WDR89Q96FK6 387 aaPredicted RBP7.89□□□□□ -1.15
UBR3-209ENST00000477461 SEMA6CQ9H3T2 930 aa7.89□□□□□ -1.15
UBR3-209ENST00000477461 PPP1R9AQ9ULJ8 1098 aa7.89□□□□□ -1.15
UBR3-209ENST00000477461 CYP26A1O43174 497 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 DYNC1LI2O43237 492 aaPredicted RBP7.88□□□□□ -1.15
UBR3-209ENST00000477461 FOSL1P15407 271 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 TAL1P17542 331 aaPredicted RBP7.88□□□□□ -1.15
UBR3-209ENST00000477461 DTHD1Q6ZMT9 781 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 TMC7Q7Z402 723 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 WDR18Q9BV38 432 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 RBCK1Q9BYM8 510 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 CCDC86Q9H6F5 360 aaKnown RBP7.88□□□□□ -1.15
UBR3-209ENST00000477461 ZFYVE1Q9HBF4 777 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 LRRC4CQ9HCJ2 640 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 DAGLAQ9Y4D2 1042 aa7.88□□□□□ -1.15
UBR3-209ENST00000477461 COL17A1Q9UMD9 1497 aaPredicted RBP7.87□□□□□ -1.15
UBR3-209ENST00000477461 MAP7Q14244 749 aa7.87□□□□□ -1.15
UBR3-209ENST00000477461 HP1BP3Q5SSJ5 553 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms