RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ASTLQ6HA08 431 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 POTEEQ6S8J3 1075 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 RINLQ6ZS11 566 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 SH3BP5LQ7L8J4 393 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ATCAYQ86WG3 371 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 PASD1Q8IV76 773 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 NIM1KQ8IY84 436 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ZSWIM2Q8NEG5 633 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 MYRIPQ8NFW9 859 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 OR6P1Q8NGX9 317 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ATL2Q8NHH9 583 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 SPATA18Q8TC71 538 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 CCDC74AQ96AQ1 378 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 E2F7Q96AV8 911 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 EAF1Q96JC9 268 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 TMEM74Q96NL1 305 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 CRBNQ96SW2 442 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 TSPAN10Q9H1Z9 355 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ARHGEF10LQ9HCE6 1279 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ZSWIM6Q9HCJ5 1215 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ACTR10Q9NZ32 417 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ZIM2Q9NZV7 527 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 ADAMTS1Q9UHI8 967 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 INTUQ9ULD6 942 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 SUPT16HQ9Y5B9 1047 aaKnown RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 PPP2R3BQ9Y5P8 575 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 SETD2Q9BYW2 2564 aaPredicted RBP3.59□□□□□ -1.83
HMGN4-202ENST00000477243 KDM2BQ8NHM5 1336 aa3.59□□□□□ -1.83
HMGN4-202ENST00000477243 MROH2BQ7Z745 1585 aa3.59□□□□□ -1.84
HMGN4-202ENST00000477243 LAMB4A4D0S4 1761 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SHTN1A0MZ66 631 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 A6NJY4 79 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 MINDY4BA8MYZ0 360 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 TMEM229AB2RXF0 380 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SCGB1D2O95969 90 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 LDHCP07864 332 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 NBPF7P0C2Y1 421 aaPredicted RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 VDRP11473 427 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 GSTT1P30711 240 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 ZAP70P43403 619 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 RAB27AP51159 221 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 LBX1P52954 281 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 EIF6P56537 245 aaKnown RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 PSMA6P60900 246 aaKnown RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 PURAQ00577 322 aaKnown RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 PICALMQ13492 652 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 LONRF2Q1L5Z9 754 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 AKAP4Q5JQC9 854 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 NXNQ6DKJ4 435 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 FAM43BQ6ZT52 329 aaPredicted RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 DEFB132Q7Z7B7 95 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 BPHLQ86WA6 291 aaPredicted RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 THNSL2Q86YJ6 484 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 TCEAL8Q8IYN2 117 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 CPXCR1Q8N123 301 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SDR16C5Q8N3Y7 309 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 PIP4P2Q8N4L2 257 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 ENAHQ8N8S7 591 aaPredicted RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 CCDC89Q8N998 374 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 NKD1Q969G9 470 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SLC10A4Q96EP9 437 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SLC4A9Q96Q91 983 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SLC26A8Q96RN1 970 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 CDC5LQ99459 802 aaKnown RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 NUDT12Q9BQG2 462 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 RSPH9Q9H1X1 276 aaPredicted RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 PPCSQ9HAB8 311 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 CHST12Q9NRB3 414 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 ST7Q9NRC1 585 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 TPX2Q9ULW0 747 aaKnown RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 MAPRE3Q9UPY8 281 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 MAPK8IP1Q9UQF2 711 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 MRPS23Q9Y3D9 190 aaKnown RBP3.58□□□□□ -1.84
HMGN4-202ENST00000477243 SPEF1Q9Y4P9 236 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 CD2APQ9Y5K6 639 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 HECTD1Q9ULT8 2610 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 ROBO2Q9HCK4 1378 aa3.58□□□□□ -1.84
HMGN4-202ENST00000477243 MAGEB6P1A0A0J9YX57 407 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 FOXN1O15353 648 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 AKAP10O43572 662 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 GALR2O43603 387 aaPredicted RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 RFPL3O75679 317 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 TRIM37O94972 964 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 INHAP05111 366 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 POU3F3P20264 500 aaPredicted RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 NEK2P51955 445 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 EPHA4P54764 986 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 GDF10P55107 478 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 NOTCH2Q04721 2471 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 NCOA1Q15788 1441 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 FAM98CQ17RN3 349 aaKnown RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 DOK7Q18PE1 504 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 PROX2Q3B8N5 592 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 PUS10Q3MIT2 529 aaKnown RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 FAM102BQ5T8I3 360 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 SPATA31A6Q5VVP1 1343 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 DIEXFQ68CQ4 756 aaKnown RBP3.57□□□□□ -1.84
HMGN4-202ENST00000477243 BLOC1S3Q6QNY0 202 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 RNF19BQ6ZMZ0 732 aa3.57□□□□□ -1.84
HMGN4-202ENST00000477243 NECAB2Q7Z6G3 386 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms