RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PPP2R3BQ9Y5P8 575 aa14.65□□□□□ -0.06
VARS2-208ENST00000477052 RFX5P48382 616 aaPredicted RBP14.64□□□□□ -0.07
VARS2-208ENST00000477052 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
VARS2-208ENST00000477052 TEPSINQ96N21 525 aa14.64□□□□□ -0.07
VARS2-208ENST00000477052 TNRC18O15417 2968 aaPredicted RBP14.64□□□□□ -0.07
VARS2-208ENST00000477052 MANSC4A6NHS7 340 aaPredicted RBP14.63□□□□□ -0.07
VARS2-208ENST00000477052 FKTNO75072 461 aa14.63□□□□□ -0.07
VARS2-208ENST00000477052 IREB2P48200 963 aaKnown RBP14.63□□□□□ -0.07
VARS2-208ENST00000477052 CAVIN4Q5BKX8 364 aa14.63□□□□□ -0.07
VARS2-208ENST00000477052 SIL1Q9H173 461 aa14.63□□□□□ -0.07
VARS2-208ENST00000477052 NOB1Q9ULX3 412 aaKnown RBP14.63□□□□□ -0.07
VARS2-208ENST00000477052 ARAP2Q8WZ64 1704 aa14.63□□□□□ -0.07
VARS2-208ENST00000477052 OTOFQ9HC10 1997 aa14.62□□□□□ -0.07
VARS2-208ENST00000477052 FGFR2P21802 821 aa14.62□□□□□ -0.07
VARS2-208ENST00000477052 OPTNQ96CV9 577 aa14.62□□□□□ -0.07
VARS2-208ENST00000477052 PTPN18Q99952 460 aa14.62□□□□□ -0.07
VARS2-208ENST00000477052 EYA2O00167 538 aa14.61□□□□□ -0.07
VARS2-208ENST00000477052 ZBTB48P10074 688 aaPredicted RBP14.61□□□□□ -0.07
VARS2-208ENST00000477052 PUM3Q15397 648 aaKnown RBP14.61□□□□□ -0.07
VARS2-208ENST00000477052 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.61□□□□□ -0.07
VARS2-208ENST00000477052 ATG9AQ7Z3C6 839 aa14.61□□□□□ -0.07
VARS2-208ENST00000477052 ANKRD13AQ8IZ07 590 aa14.61□□□□□ -0.07
VARS2-208ENST00000477052 PA2G4Q9UQ80 394 aaKnown RBP14.61□□□□□ -0.07
VARS2-208ENST00000477052 IFIT1P09914 478 aaKnown RBP14.6□□□□□ -0.07
VARS2-208ENST00000477052 CAP1Q01518 475 aa14.6□□□□□ -0.07
VARS2-208ENST00000477052 CRHR2Q13324 411 aa14.6□□□□□ -0.07
VARS2-208ENST00000477052 TNFAIP1Q13829 316 aa14.6□□□□□ -0.07
VARS2-208ENST00000477052 VGLL4Q14135 290 aa14.6□□□□□ -0.07
VARS2-208ENST00000477052 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
VARS2-208ENST00000477052 TRMT2AQ8IZ69 625 aaKnown RBP14.6□□□□□ -0.07
VARS2-208ENST00000477052 TEKT1Q969V4 418 aa14.6□□□□□ -0.07
VARS2-208ENST00000477052 UBTFL1P0CB47 393 aaPredicted RBP14.59□□□□□ -0.07
VARS2-208ENST00000477052 APOBEC3HQ6NTF7 200 aaKnown RBP14.59□□□□□ -0.07
VARS2-208ENST00000477052 CD99L2Q8TCZ2 262 aa14.59□□□□□ -0.07
VARS2-208ENST00000477052 TBC1D22AQ8WUA7 517 aa14.59□□□□□ -0.07
VARS2-208ENST00000477052 CFHR5Q9BXR6 569 aa14.59□□□□□ -0.07
VARS2-208ENST00000477052 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
VARS2-208ENST00000477052 LRRFIP2Q9Y608 721 aaKnown RBP14.59□□□□□ -0.07
VARS2-208ENST00000477052 ALDH1A1P00352 501 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 SLC5A1P13866 664 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 TNNI2P48788 182 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 INHBEP58166 350 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 MAP3K9P80192 1104 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 DIXDC1Q155Q3 683 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 PKN2Q16513 984 aaKnown RBP14.58□□□□□ -0.08
VARS2-208ENST00000477052 NOM1Q5C9Z4 860 aaKnown RBP14.58□□□□□ -0.08
VARS2-208ENST00000477052 FBXO46Q6PJ61 603 aaPredicted RBP14.58□□□□□ -0.08
VARS2-208ENST00000477052 ZKSCAN4Q969J2 545 aaPredicted RBP14.58□□□□□ -0.08
VARS2-208ENST00000477052 OTUD5Q96G74 571 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 ZDHHC15Q96MV8 337 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 MEIS3Q99687 375 aa14.58□□□□□ -0.08
VARS2-208ENST00000477052 ADORA1P30542 326 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 MIGA2Q7L4E1 593 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 OTOP1Q7RTM1 612 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.57□□□□□ -0.08
VARS2-208ENST00000477052 BRI3BPQ8WY22 251 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 LPIN2Q92539 896 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 MS4A4AQ96JQ5 239 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
VARS2-208ENST00000477052 CCL15-CCL14A0A0B4J2E2 113 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 ECM2O94769 699 aaPredicted RBP14.56□□□□□ -0.08
VARS2-208ENST00000477052 PRDX5P30044 214 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 PHKA1P46020 1223 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 HDLBPQ00341 1268 aaKnown RBP14.56□□□□□ -0.08
VARS2-208ENST00000477052 TCP10Q12799 353 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 CCL15Q16663 113 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 ATP2B3Q16720 1220 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 SNCAIPQ9Y6H5 919 aa14.56□□□□□ -0.08
VARS2-208ENST00000477052 TESPA1A2RU30 521 aaPredicted RBP14.55□□□□□ -0.08
VARS2-208ENST00000477052 UNCXA6NJT0 531 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 RARSP54136 660 aaKnown RBP14.55□□□□□ -0.08
VARS2-208ENST00000477052 FAM43AQ8N2R8 423 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 WRNIP1Q96S55 665 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 TMOD2Q9NZR1 351 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 CEP126Q9P2H0 1117 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 DAGLAQ9Y4D2 1042 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 CSADQ9Y600 493 aa14.55□□□□□ -0.08
VARS2-208ENST00000477052 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 NFIAQ12857 509 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 OTUD7BQ6GQQ9 843 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 CDC42EP5Q6NZY7 148 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 ZFPM1Q8IX07 1006 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 WDR66Q8TBY9 1149 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 API5Q9BZZ5 524 aaKnown RBP14.54□□□□□ -0.08
VARS2-208ENST00000477052 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.54□□□□□ -0.08
VARS2-208ENST00000477052 KIF16BQ96L93 1317 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 LAMB1P07942 1786 aa14.54□□□□□ -0.08
VARS2-208ENST00000477052 HTTP42858 3142 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 PDE4DIPQ5VU43 2346 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 INPP5BP32019 993 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 TIMM10P62072 90 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 SP3Q02447 781 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 TAF1CQ15572 869 aaPredicted RBP14.53□□□□□ -0.08
VARS2-208ENST00000477052 HHIPL2Q6UWX4 724 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 MRIQ9BWK5 157 aa14.53□□□□□ -0.08
VARS2-208ENST00000477052 MAST3O60307 1309 aa14.52□□□□□ -0.08
VARS2-208ENST00000477052 POTEFA5A3E0 1075 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 SPDYE5A6NIY4 337 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 IRF6O14896 467 aa14.52□□□□□ -0.09
VARS2-208ENST00000477052 CIAO1O76071 339 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms