RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 ANKRD24Q8TF21 1146 aa9.46□□□□□ -0.9
TM9SF3-204ENST00000475401 FBXO24O75426 580 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 SELPP16109 830 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 POU4F3Q15319 338 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 CCDC85BQ15834 202 aaPredicted RBP9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 HGSNATQ68CP4 663 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 SHISA2Q6UWI4 295 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 ACAD11Q709F0 780 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 SV2BQ7L1I2 683 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 EMILIN2Q9BXX0 1053 aa9.45□□□□□ -0.9
TM9SF3-204ENST00000475401 DDX3YO15523 660 aaKnown RBP9.44□□□□□ -0.9
TM9SF3-204ENST00000475401 NECAB3Q96P71 396 aaPredicted RBP9.44□□□□□ -0.9
TM9SF3-204ENST00000475401 KRBA1A5PL33 1030 aa9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 MRPL58Q14197 206 aaKnown RBP9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 MEI1Q5TIA1 1274 aa9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 TMEM130Q8N3G9 435 aa9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 MRRFQ96E11 262 aaKnown RBP9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 AKTIPQ9H8T0 292 aa9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 KCNK4Q9NYG8 393 aa9.43□□□□□ -0.9
TM9SF3-204ENST00000475401 ADAM11O75078 769 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 RLBP1P12271 317 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 LMNB1P20700 586 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 NME2P22392 152 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 MAOBP27338 520 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 SULF2Q8IWU5 870 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 TMEM87AQ8NBN3 555 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 RUSC1Q9BVN2 902 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 RNF208Q9H0X6 261 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 CBX8Q9HC52 389 aa9.42□□□□□ -0.9
TM9SF3-204ENST00000475401 USP31Q70CQ4 1352 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 LOC100289279A0A1B0GTE1 492 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 CTSHP09668 335 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 ARNTP27540 789 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 RBM25P49756 843 aaKnown RBP9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 PDE3AQ14432 1141 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 LRRC14Q15048 493 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 TSNAXIP1Q2TAA8 658 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 UBASH3BQ8TF42 649 aa9.41□□□□□ -0.9
TM9SF3-204ENST00000475401 C1QTNF9BB2RNN3 333 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 ENC1O14682 589 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 VAMP1P23763 118 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 NUTM2GQ5VZR2 741 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 CD163Q86VB7 1156 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 TRIM56Q9BRZ2 755 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 NOC4LQ9BVI4 516 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 CEP41Q9BYV8 373 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 CYP4F12Q9HCS2 524 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 RAD18Q9NS91 495 aa9.4□□□□□ -0.9
TM9SF3-204ENST00000475401 F8W735 103 aaPredicted RBP9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 TM4SF5O14894 197 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 WISP1O95388 367 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 GSTP1P09211 210 aaKnown RBP9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 ADGRE1Q14246 886 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 MBTPS1Q14703 1052 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 EXOSC6Q5RKV6 272 aaKnown RBP9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 FDX2Q6P4F2 183 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 TXNRD3Q86VQ6 643 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 WFDC12Q8WWY7 111 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 KCNB2Q92953 911 aa9.39□□□□□ -0.91
TM9SF3-204ENST00000475401 CELA3AP09093 270 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 GLB1P16278 677 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 CHRNA4P43681 627 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 GATA4P43694 442 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 GSK3AP49840 483 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 KIAA1211Q6ZU35 1233 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 BACH2Q9BYV9 841 aa9.38□□□□□ -0.91
TM9SF3-204ENST00000475401 MEGF11A6BM72 1044 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 SART1O43290 800 aaKnown RBP9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 PWP1Q13610 501 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 PLA2G4EQ3MJ16 856 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 PCNX4Q63HM2 1172 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 ANKRD34AQ69YU3 496 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 TTBK2Q6IQ55 1244 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 AGGF1Q8N302 714 aaeCLIP9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 ACSBG1Q96GR2 724 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 NRSN2Q9GZP1 204 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 CYP8B1Q9UNU6 501 aa9.37□□□□□ -0.91
TM9SF3-204ENST00000475401 ALX3O95076 343 aa9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 MAP3K11Q16584 847 aa9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 LLGL2Q6P1M3 1020 aa9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 HS2ST1Q7LGA3 356 aa9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 RELL1Q8IUW5 271 aa9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 ZC3H12CQ9C0D7 883 aaKnown RBP9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 KRT82Q9NSB4 513 aa9.36□□□□□ -0.91
TM9SF3-204ENST00000475401 PAGE1O75459 146 aa9.35□□□□□ -0.91
TM9SF3-204ENST00000475401 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
TM9SF3-204ENST00000475401 NOS3P29474 1203 aa9.35□□□□□ -0.91
TM9SF3-204ENST00000475401 RPS26P62854 115 aaKnown RBP9.35□□□□□ -0.91
TM9SF3-204ENST00000475401 MAP1SQ66K74 1059 aaPredicted RBP9.35□□□□□ -0.91
TM9SF3-204ENST00000475401 C12orf50Q8NA57 414 aaPredicted RBP9.35□□□□□ -0.91
TM9SF3-204ENST00000475401 UNCXA6NJT0 531 aa9.34□□□□□ -0.91
TM9SF3-204ENST00000475401 SCAMP3O14828 347 aaKnown RBP9.34□□□□□ -0.91
TM9SF3-204ENST00000475401 BMP6P22004 513 aa9.34□□□□□ -0.91
TM9SF3-204ENST00000475401 ZNF76P36508 570 aa9.34□□□□□ -0.91
TM9SF3-204ENST00000475401 SCARA3Q6AZY7 606 aa9.34□□□□□ -0.91
TM9SF3-204ENST00000475401 TMPRSS13Q9BYE2 586 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms