RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ITGA6P23229 1130 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 BMP2KLQ5H9B9 411 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 HS2ST1Q7LGA3 356 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 REM2Q8IYK8 340 aaPredicted RBP5.28□□□□□ -1.56
CCNL1-215ENST00000474539 GOLGA1Q92805 767 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 AP5M1Q9H0R1 490 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 TNNQ9UQP3 1299 aa5.28□□□□□ -1.56
CCNL1-215ENST00000474539 DIP2BQ9P265 1576 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 P4HA1P13674 534 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 RPS12P25398 132 aaKnown RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 GBP2P32456 591 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 SLC9C2Q5TAH2 1124 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 FAM160B1Q5W0V3 765 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 OTUD6AQ7L8S5 288 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 HOMER1Q86YM7 354 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC85AQ96PX6 553 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 UNC13BO14795 1591 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 KDRP35968 1356 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 NAPAP54920 295 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 CTSWP56202 376 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 SETQ01105 290 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 PLS1Q14651 629 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 CEP128Q6ZU80 1094 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 FAM160B2Q86V87 743 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 ANO10Q9NW15 660 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 MYCNP04198 464 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 ATP2B1P20020 1258 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 TMOD1P28289 359 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 KIF11P52732 1056 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 E2F5Q15329 346 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 NOM1Q5C9Z4 860 aaKnown RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC181Q5TID7 509 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 PPP1R2P3Q6NXS1 205 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 KRT25Q7Z3Z0 450 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 APPBP2Q92624 585 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 IQCDQ96DY2 449 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 TCHPQ9BT92 498 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 PALLDQ8WX93 1383 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 BICDL2A1A5D9 508 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 PALM3A6NDB9 673 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 CHL1O00533 1208 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 ATF7P17544 494 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 SREBF2Q12772 1141 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 KCTD2Q14681 263 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 DNAJC10Q8IXB1 793 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 MRPL50Q8N5N7 158 aaKnown RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 CTAGE1Q96RT6 745 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 TMEM106CQ9BVX2 250 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 IL1RAPL2Q9NP60 686 aa5.27□□□□□ -1.57
CCNL1-215ENST00000474539 DDX19AQ9NUU7 478 aaKnown RBP5.27□□□□□ -1.57
CCNL1-215ENST00000474539 USP19O94966 1318 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 REREQ9P2R6 1566 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 FAM83GA6ND36 823 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 RIMBP2O15034 1052 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 USO1O60763 962 aaKnown RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 TRIM37O94972 964 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 GNAT1P11488 350 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 ACTN2P35609 894 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 UBXN2AP68543 259 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 PICALMQ13492 652 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 GIMAP8Q8ND71 665 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 KIAA1524Q8TCG1 905 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 KCNG4Q8TDN1 519 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 SREK1Q8WXA9 508 aaKnown RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 MAP7D2Q96T17 732 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 TRIM5Q9C035 493 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 ATP8A2Q9NTI2 1148 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 NARFQ9UHQ1 456 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 KCNH4Q9UQ05 1017 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 CD2APQ9Y5K6 639 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 IGSF1Q8N6C5 1336 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 SETBP1Q9Y6X0 1596 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 SENP3-EIF4A1A0A087X0R7 540 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 EIF5P55010 431 aaKnown RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 GRM1Q13255 1194 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 SPA17Q15506 151 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 BRAPQ7Z569 592 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 PODNQ7Z5L7 613 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 FOXP4Q8IVH2 680 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 EHBP1Q8NDI1 1231 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 COA7Q96BR5 231 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 FAM81BQ96LP2 452 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 NOX5Q96PH1 765 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 TNMDQ9H2S6 317 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 CEP170BQ9Y4F5 1589 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 GOLGA6L9A6NEM1 432 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 SERPINC1P01008 464 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 PLCD1P51178 756 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 GRAPQ13588 217 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 SEPT7Q16181 437 aaKnown RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 RCSD1Q6JBY9 416 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 FASTKD5Q7L8L6 764 aaKnown RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 MNS1Q8NEH6 495 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 GRAPLQ8TC17 118 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 CCDC8Q9H0W5 538 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-215ENST00000474539 EXOC6BQ9Y2D4 811 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 USP16Q9Y5T5 823 aa5.26□□□□□ -1.57
CCNL1-215ENST00000474539 NEMFO60524 1076 aa5.25□□□□□ -1.57
CCNL1-215ENST00000474539 PHACTR2O75167 634 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms