RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 ADD2P35612 726 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 MAP3K12Q12852 859 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 SLC9C2Q5TAH2 1124 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 ZNF589Q86UQ0 364 aaPredicted RBP12.92□□□□□ -0.34
SP140-208ENST00000473711 TTLL6Q8N841 843 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
SP140-208ENST00000473711 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 ABCF2Q9UG63 623 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
SP140-208ENST00000473711 M0R2C6 588 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 C21orf2O43822 256 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 PDE6AP16499 860 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 PLCG2P16885 1265 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 MCCP23508 829 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 TGFB2P61812 414 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 MAGEB6Q8N7X4 407 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 C7orf43Q8WVR3 580 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 APPBP2Q92624 585 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 OSBP2Q969R2 916 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
SP140-208ENST00000473711 CD209Q9NNX6 404 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 JAG2Q9Y219 1238 aa12.91□□□□□ -0.34
SP140-208ENST00000473711 CCDC171Q6TFL3 1326 aa12.9□□□□□ -0.34
SP140-208ENST00000473711 ZNF532Q9HCE3 1301 aa12.9□□□□□ -0.34
SP140-208ENST00000473711 EPB41L2O43491 1005 aaKnown RBP12.9□□□□□ -0.34
SP140-208ENST00000473711 PTGER2P43116 358 aa12.9□□□□□ -0.34
SP140-208ENST00000473711 UBE3CQ15386 1083 aa12.9□□□□□ -0.34
SP140-208ENST00000473711 KIF2CQ99661 725 aa12.9□□□□□ -0.34
SP140-208ENST00000473711 MED23Q9ULK4 1368 aa12.9□□□□□ -0.34
SP140-208ENST00000473711 COL1A1P02452 1464 aaPredicted RBP12.9□□□□□ -0.34
SP140-208ENST00000473711 MAST3O60307 1309 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 TCRBV5S4A2TA0A5A2 114 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 HSPA4P34932 840 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 PSEN1P49768 467 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 ERICH6Q7L0X2 663 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 MAP4K1Q92918 833 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 DDRGK1Q96HY6 314 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 EYA3Q99504 573 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 PUS7LQ9H0K6 701 aaKnown RBP12.89□□□□□ -0.35
SP140-208ENST00000473711 PIM2Q9P1W9 311 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 SLX4Q8IY92 1834 aa12.89□□□□□ -0.35
SP140-208ENST00000473711 PDS5AQ29RF7 1337 aaKnown RBP12.88□□□□□ -0.35
SP140-208ENST00000473711 G3V3G9 751 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 IL1R1P14778 569 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 CYP7A1P22680 504 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 YY1P25490 414 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 WDR66Q8TBY9 1149 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 IPO9Q96P70 1041 aaKnown RBP12.88□□□□□ -0.35
SP140-208ENST00000473711 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 PALD1Q9ULE6 856 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 RBM8AQ9Y5S9 174 aaKnown RBP12.88□□□□□ -0.35
SP140-208ENST00000473711 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
SP140-208ENST00000473711 IRX5P78411 483 aaPredicted RBP12.87□□□□□ -0.35
SP140-208ENST00000473711 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
SP140-208ENST00000473711 NECTIN1Q15223 517 aa12.87□□□□□ -0.35
SP140-208ENST00000473711 VPS53Q5VIR6 699 aa12.87□□□□□ -0.35
SP140-208ENST00000473711 SPTY2D1Q68D10 685 aaPredicted RBP12.87□□□□□ -0.35
SP140-208ENST00000473711 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
SP140-208ENST00000473711 GPAA1O43292 621 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 HSPD1P10809 573 aaKnown RBP12.86□□□□□ -0.35
SP140-208ENST00000473711 PRDX5P30044 214 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 CCDC93Q567U6 631 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 DALRD3Q5D0E6 543 aaKnown RBP12.86□□□□□ -0.35
SP140-208ENST00000473711 CREB3L3Q68CJ9 461 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
SP140-208ENST00000473711 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
SP140-208ENST00000473711 SUPT20HQ8NEM7 779 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 FBXW7Q969H0 707 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 SPON1Q9HCB6 807 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 SNX14Q9Y5W7 946 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
SP140-208ENST00000473711 SLC27A2O14975 620 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
SP140-208ENST00000473711 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 ANAPC15P60006 121 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 GTF2IP78347 998 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 MECOMQ03112 1051 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 RABEP1Q15276 862 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 GRIK5Q16478 980 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 RTKN2Q8IZC4 609 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 MIGA1Q8NAN2 632 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 AIDAQ96BJ3 306 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
SP140-208ENST00000473711 DSCC1Q9BVC3 393 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 ARMT1Q9H993 441 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 DUOX1Q9NRD9 1551 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 SALL1Q9NSC2 1324 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 LTBP1Q14766 1721 aa12.85□□□□□ -0.35
SP140-208ENST00000473711 MYO5AQ9Y4I1 1855 aaKnown RBP12.85□□□□□ -0.35
SP140-208ENST00000473711 MBD4O95243 580 aa12.84□□□□□ -0.35
SP140-208ENST00000473711 AOC3Q16853 763 aa12.84□□□□□ -0.35
SP140-208ENST00000473711 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms