RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 ERO1AQ96HE7 468 aa12.27□□□□□ -0.45
MCF2L-223ENST00000473345 SUCLG2Q96I99 432 aa12.27□□□□□ -0.45
MCF2L-223ENST00000473345 MYH16Q9H6N6 1097 aa12.27□□□□□ -0.45
MCF2L-223ENST00000473345 TTF2Q9UNY4 1162 aaKnown RBP12.27□□□□□ -0.45
MCF2L-223ENST00000473345 SALL2Q9Y467 1007 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-223ENST00000473345 ARAP2Q8WZ64 1704 aa12.27□□□□□ -0.45
MCF2L-223ENST00000473345 IL16Q14005 1332 aa12.27□□□□□ -0.45
MCF2L-223ENST00000473345 IREB2P48200 963 aaKnown RBP12.26□□□□□ -0.45
MCF2L-223ENST00000473345 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
MCF2L-223ENST00000473345 COLQQ9Y215 455 aaPredicted RBP12.26□□□□□ -0.45
MCF2L-223ENST00000473345 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
MCF2L-223ENST00000473345 SNCAIPQ9Y6H5 919 aa12.26□□□□□ -0.45
MCF2L-223ENST00000473345 CCL15-CCL14A0A0B4J2E2 113 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 UNCXA6NJT0 531 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 GRM8O00222 908 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 ECM2O94769 699 aaPredicted RBP12.25□□□□□ -0.45
MCF2L-223ENST00000473345 CRKP46108 304 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 CCL15Q16663 113 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 LRRC24Q50LG9 513 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 INTS3Q68E01 1043 aaKnown RBP12.25□□□□□ -0.45
MCF2L-223ENST00000473345 SH3TC2Q8TF17 1288 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 SHISA4Q96DD7 197 aa12.25□□□□□ -0.45
MCF2L-223ENST00000473345 MYO1BO43795 1136 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 NBPF7P0C2Y1 421 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-223ENST00000473345 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 ANKRD44Q8N8A2 993 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 VGLL2Q8N8G2 317 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 KLHDC4Q8TBB5 520 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 ZKSCAN4Q969J2 545 aaPredicted RBP12.24□□□□□ -0.45
MCF2L-223ENST00000473345 OTUD5Q96G74 571 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 CNNM1Q9NRU3 951 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 SERPINA10Q9UK55 444 aa12.24□□□□□ -0.45
MCF2L-223ENST00000473345 KIAA0100Q14667 2235 aaKnown RBP12.23□□□□□ -0.45
MCF2L-223ENST00000473345 BTBD19C9JJ37 291 aa12.23□□□□□ -0.45
MCF2L-223ENST00000473345 HIBADHP31937 336 aaKnown RBP12.23□□□□□ -0.45
MCF2L-223ENST00000473345 MAP3K9P80192 1104 aa12.23□□□□□ -0.45
MCF2L-223ENST00000473345 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
MCF2L-223ENST00000473345 MTFR1Q15390 333 aa12.23□□□□□ -0.45
MCF2L-223ENST00000473345 TAF1CQ15572 869 aaPredicted RBP12.23□□□□□ -0.45
MCF2L-223ENST00000473345 APOBEC3HQ6NTF7 200 aaKnown RBP12.23□□□□□ -0.45
MCF2L-223ENST00000473345 ADGRA2Q96PE1 1338 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 SPDYE5A6NIY4 337 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 H0YGN5 161 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 IRF6O14896 467 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 CHAF1AQ13111 956 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-223ENST00000473345 MOGSQ13724 837 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 CCDC57Q2TAC2 916 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 GCC1Q96CN9 775 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
MCF2L-223ENST00000473345 SLURP2P0DP57 97 aa12.21□□□□□ -0.45
MCF2L-223ENST00000473345 INPP5BP32019 993 aa12.21□□□□□ -0.45
MCF2L-223ENST00000473345 BCAMP50895 628 aa12.21□□□□□ -0.45
MCF2L-223ENST00000473345 BICC1Q9H694 974 aaKnown RBP12.21□□□□□ -0.45
MCF2L-223ENST00000473345 UTYO14607 1347 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 TLR2O60603 784 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 GTF2A2P52657 109 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 LACTBP83111 547 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-223ENST00000473345 RABL6Q3YEC7 729 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-223ENST00000473345 SLC9C1Q4G0N8 1177 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 TAF7LQ5H9L4 462 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 OTUD7BQ6GQQ9 843 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 C17orf99Q6UX52 265 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
MCF2L-223ENST00000473345 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 SLC4A10Q6U841 1118 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 MIGA2Q7L4E1 593 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 UBE2Q1Q7Z7E8 422 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 ZFPM1Q8IX07 1006 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 ZDHHC15Q96MV8 337 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 WRNIP1Q96S55 665 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 CPA4Q9UI42 421 aa12.19□□□□□ -0.46
MCF2L-223ENST00000473345 SZT2Q5T011 3432 aa12.18□□□□□ -0.46
MCF2L-223ENST00000473345 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
MCF2L-223ENST00000473345 FGFR2P21802 821 aa12.18□□□□□ -0.46
MCF2L-223ENST00000473345 NFIAQ12857 509 aa12.18□□□□□ -0.46
MCF2L-223ENST00000473345 NCBP3Q53F19 620 aaKnown RBP12.18□□□□□ -0.46
MCF2L-223ENST00000473345 ERO1BQ86YB8 467 aa12.18□□□□□ -0.46
MCF2L-223ENST00000473345 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-223ENST00000473345 C9orf78Q9NZ63 289 aaPredicted RBP12.18□□□□□ -0.46
MCF2L-223ENST00000473345 RFX5P48382 616 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-223ENST00000473345 PPIL2Q13356 520 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 SLC4A8Q2Y0W8 1093 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 SRCIN1Q9C0H9 1055 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 PRO3102Q9H379 93 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
MCF2L-223ENST00000473345 CSADQ9Y600 493 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 ATRNL1Q5VV63 1379 aa12.17□□□□□ -0.46
MCF2L-223ENST00000473345 PDE8BO95263 885 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 CETPP11597 493 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 OSBPP22059 807 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
MCF2L-223ENST00000473345 DIXDC1Q155Q3 683 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 GPAT2Q6NUI2 795 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 FAM83AQ86UY5 434 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 TEKT1Q969V4 418 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 MRS2Q9HD23 443 aa12.16□□□□□ -0.46
MCF2L-223ENST00000473345 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms