RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 IRX3P78415 501 aaPredicted RBP11.9□□□□□ -0.51
APTX-216ENST00000472896 NOGQ13253 232 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.51
APTX-216ENST00000472896 ANKRD44Q8N8A2 993 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.51
APTX-216ENST00000472896 CHAMP1Q96JM3 812 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 VPS33BQ9H267 617 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 OSBPL3Q9H4L5 887 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 C1orf115Q9H7X2 142 aa11.9□□□□□ -0.51
APTX-216ENST00000472896 CNOT7Q9UIV1 285 aaKnown RBP11.9□□□□□ -0.51
APTX-216ENST00000472896 YDJCA8MPS7 323 aa11.89□□□□□ -0.51
APTX-216ENST00000472896 VAMP4O75379 141 aa11.89□□□□□ -0.51
APTX-216ENST00000472896 CCDC192P0DO97 292 aa11.89□□□□□ -0.51
APTX-216ENST00000472896 MYL6BP14649 208 aa11.89□□□□□ -0.51
APTX-216ENST00000472896 MPNDQ8N594 471 aa11.89□□□□□ -0.51
APTX-216ENST00000472896 CCDC171Q6TFL3 1326 aa11.88□□□□□ -0.51
APTX-216ENST00000472896 KIF23Q02241 960 aaPredicted RBP11.88□□□□□ -0.51
APTX-216ENST00000472896 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
APTX-216ENST00000472896 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
APTX-216ENST00000472896 YY1AP1Q9H869 796 aa11.88□□□□□ -0.51
APTX-216ENST00000472896 RNF186Q9NXI6 227 aa11.88□□□□□ -0.51
APTX-216ENST00000472896 HTATSF1O43719 755 aaKnown RBP11.87□□□□□ -0.51
APTX-216ENST00000472896 NEMFO60524 1076 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 CYP2C19P33261 490 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 BMS1Q14692 1282 aaKnown RBP11.87□□□□□ -0.51
APTX-216ENST00000472896 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 SAMD7Q7Z3H4 446 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 KIF1BPQ96EK5 621 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 NLRP3Q96P20 1036 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
APTX-216ENST00000472896 TRPA1O75762 1119 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 EGFRP00533 1210 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 CAPN2P17655 700 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 EIF4A1P60842 406 aaKnown RBP11.87□□□□□ -0.51
APTX-216ENST00000472896 TNIP1Q15025 636 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 RGMBQ6NW40 437 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 DPP8Q6V1X1 898 aaPredicted RBP11.87□□□□□ -0.51
APTX-216ENST00000472896 GIGYF2Q6Y7W6 1299 aaKnown RBP11.87□□□□□ -0.51
APTX-216ENST00000472896 SP8Q8IXZ3 490 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 SUPT20HQ8NEM7 779 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 FAM200AQ8TCP9 573 aa11.87□□□□□ -0.51
APTX-216ENST00000472896 POLR2AP24928 1970 aaKnown RBP11.86□□□□□ -0.51
APTX-216ENST00000472896 SMARCA5O60264 1052 aaPredicted RBP11.86□□□□□ -0.51
APTX-216ENST00000472896 ZSCAN22P10073 491 aaPredicted RBP11.86□□□□□ -0.51
APTX-216ENST00000472896 GNAI1P63096 354 aa11.86□□□□□ -0.51
APTX-216ENST00000472896 PPP1R42Q7Z4L9 355 aa11.86□□□□□ -0.51
APTX-216ENST00000472896 TEX2Q8IWB9 1127 aa11.86□□□□□ -0.51
APTX-216ENST00000472896 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
APTX-216ENST00000472896 THUMPD2Q9BTF0 503 aaKnown RBP11.86□□□□□ -0.51
APTX-216ENST00000472896 SRCIN1Q9C0H9 1055 aa11.86□□□□□ -0.51
APTX-216ENST00000472896 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
APTX-216ENST00000472896 H7C1D1 291 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 KIF2AO00139 706 aaPredicted RBP11.85□□□□□ -0.51
APTX-216ENST00000472896 AP5Z1O43299 807 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 BBOX1O75936 387 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 PTGS1P23219 599 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 CDC25BP30305 580 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 PLCB2Q00722 1185 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 CEP135Q66GS9 1140 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 CTR9Q6PD62 1173 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 NOL10Q9BSC4 688 aaKnown RBP11.85□□□□□ -0.51
APTX-216ENST00000472896 TMX4Q9H1E5 349 aaPredicted RBP11.85□□□□□ -0.51
APTX-216ENST00000472896 GBA2Q9HCG7 927 aaPredicted RBP11.85□□□□□ -0.51
APTX-216ENST00000472896 CDHR2Q9BYE9 1310 aa11.85□□□□□ -0.51
APTX-216ENST00000472896 ADM5C9JUS6 153 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 TPD52L1Q16890 204 aaPredicted RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 KMT5BQ4FZB7 885 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 TBC1D10BQ4KMP7 808 aaPredicted RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 TPRNQ4KMQ1 711 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 TEX35Q5T0J7 233 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 PRPF38BQ5VTL8 546 aaKnown RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 KRT26Q7Z3Y9 468 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 LRP10Q7Z4F1 713 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 SPC24Q8NBT2 197 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 CSRNP1Q96S65 589 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 SAGE1Q9NXZ1 904 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 PSMD14O00487 310 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 ZNF157P51786 506 aaPredicted RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 MUM1L1Q5H9M0 696 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 RBM26Q5T8P6 1007 aaKnown RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 CCDC102AQ96A19 550 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 C16orf45Q96MC5 204 aaPredicted RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 ESYT1Q9BSJ8 1104 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 KCNQ5Q9NR82 932 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 KCND1Q9NSA2 647 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 FEZ2Q9UHY8 353 aaPredicted RBP11.84□□□□□ -0.51
APTX-216ENST00000472896 CNPY2Q9Y2B0 182 aa11.84□□□□□ -0.51
APTX-216ENST00000472896 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 CHRM1P11229 460 aaPredicted RBP11.83□□□□□ -0.52
APTX-216ENST00000472896 PDIA6Q15084 440 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 PARP10Q53GL7 1025 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 ZSCAN25Q6NSZ9 544 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 CCDC186Q7Z3E2 898 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 TXLNBQ8N3L3 684 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 C2orf69Q8N8R5 385 aa11.83□□□□□ -0.52
APTX-216ENST00000472896 DPF2Q92785 391 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms