RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	HSCB	Q8IWL3	235 aa		12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	NSUN4	Q96CB9	384 aa	Known RBP	12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	FAM163A	Q96GL9	167 aa	Predicted RBP	12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	STRBP	Q96SI9	672 aa	Known RBP	12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	SEC62	Q99442	399 aa	Known RBP	12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	MRI	Q9BWK5	157 aa		12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	NACAP1	Q9BZK3	213 aa		12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	PUS7L	Q9H0K6	701 aa	Known RBP	12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	SNX14	Q9Y5W7	946 aa		12.9	□□□□□ -0.34
RPS18-231	ENST00000472218	SRCAP	Q6ZRS2	3230 aa		12.89	□□□□□ -0.35
RPS18-231	ENST00000472218	PATL2	C9JE40	543 aa	Known RBP	12.89	□□□□□ -0.35
RPS18-231	ENST00000472218	SLC27A2	O14975	620 aa		12.89	□□□□□ -0.35
RPS18-231	ENST00000472218	DALRD3	Q5D0E6	543 aa	Known RBP	12.89	□□□□□ -0.35
RPS18-231	ENST00000472218	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.89	□□□□□ -0.35
RPS18-231	ENST00000472218	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.89	□□□□□ -0.35
RPS18-231	ENST00000472218		A0A0G2JLW4	131 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	MAGEB6P1	A0A0J9YX57	407 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218		G3V3G9	751 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	PPP4C	P60510	307 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	MECOM	Q03112	1051 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	CHAF1A	Q13111	956 aa	Predicted RBP	12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	IMMT	Q16891	758 aa	Known RBP	12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	DCAF8	Q5TAQ9	597 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	STRIP1	Q5VSL9	837 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	DZIP1	Q86YF9	867 aa	Known RBP	12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	ZSWIM6	Q9HCJ5	1215 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	PALD1	Q9ULE6	856 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	DLEC1	Q9Y238	1755 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	DOCK2	Q92608	1830 aa		12.88	□□□□□ -0.35
RPS18-231	ENST00000472218	BAG3	O95817	575 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	PLCG2	P16885	1265 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	MMP14	P50281	582 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	MFSD14B	Q5SR56	506 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	CCDC129	Q6ZRS4	1044 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	RIOK1	Q9BRS2	568 aa	Known RBP	12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	TBC1D2	Q9BYX2	928 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	CYP46A1	Q9Y6A2	500 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	LTBP3	Q9NS15	1303 aa		12.87	□□□□□ -0.35
RPS18-231	ENST00000472218	C21orf2	O43822	256 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	MBD4	O95243	580 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	FGA	P02671	866 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	CHGB	P05060	677 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	PC	P11498	1178 aa	Known RBP	12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	PRDX5	P30044	214 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	NEK4	P51957	841 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	HDLBP	Q00341	1268 aa	Known RBP	12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	ANKRD1	Q15327	319 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	VPS53	Q5VIR6	699 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	TTLL5	Q6EMB2	1281 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	RASEF	Q8IZ41	740 aa		12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	NOL10	Q9BSC4	688 aa	Known RBP	12.86	□□□□□ -0.35
RPS18-231	ENST00000472218	SLX4	Q8IY92	1834 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218		K7ELQ4	463 aa	Predicted RBP	12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	FOXP2	O15409	715 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	CYP21A2	P08686	494 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	RUFY3	Q7L099	469 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	FBXL16	Q8N461	479 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	GPR101	Q96P66	508 aa	Predicted RBP	12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	ATP8A2	Q9NTI2	1148 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	GAK	O14976	1311 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	WDR19	Q8NEZ3	1342 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	MYO3B	Q8WXR4	1341 aa		12.85	□□□□□ -0.35
RPS18-231	ENST00000472218	MYH7	P12883	1935 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	GPR75-ASB3	A0A0A6YYF3	556 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	USP17L3	A6NCW0	530 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	USP17L4	A6NCW7	530 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	GSG1L2	A8MUP6	293 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	ZNF213	O14771	459 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	RIMBP2	O15034	1052 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	PPIP5K2	O43314	1243 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	GTF2I	P78347	998 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	SLFNL1	Q499Z3	407 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	BLOC1S2	Q6QNY1	142 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	HHIPL2	Q6UWX4	724 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	OLFM4	Q6UX06	510 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	USP17L1	Q7RTZ2	530 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	SLC51A	Q86UW1	340 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	IFNL3	Q8IZI9	196 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	ZNF384	Q8TF68	577 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	JAKMIP1	Q96N16	626 aa	Known RBP	12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	TTC14	Q96N46	770 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	NEK1	Q96PY6	1258 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	NAPB	Q9H115	298 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	TAOK2	Q9UL54	1235 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	SLC4A4	Q9Y6R1	1079 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	MROH7-TTC4	A0A0A0MT08	1334 aa		12.84	□□□□□ -0.35
RPS18-231	ENST00000472218	ECE2	O60344	883 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	APP	P05067	770 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	CAST	P20810	708 aa	Known RBP	12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	LCORL	Q8N3X6	602 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	CHMP4C	Q96CF2	233 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	ZSCAN31	Q96LW9	406 aa	Predicted RBP	12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	MTA3	Q9BTC8	594 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	TAOK3	Q9H2K8	898 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	RNF41	Q9H4P4	317 aa	Predicted RBP	12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	ARMT1	Q9H993	441 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	ANAPC4	Q9UJX5	808 aa		12.83	□□□□□ -0.36
RPS18-231	ENST00000472218	CACNA1S	Q13698	1873 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms