RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 NMRK2Q9NPI5 230 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 ABCF2Q9UG63 623 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 PGAP2Q9UHJ9 254 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 SALL3Q9BXA9 1300 aa15.36■□□□□ 0.05
SPTLC1-204ENST00000469778 MYO1BO43795 1136 aa15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 CYP2E1P05181 493 aaPredicted RBP15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 ZAP70P43403 619 aa15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 PDE1AP54750 535 aa15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 DZIP1Q86YF9 867 aaKnown RBP15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 ZDHHC15Q96MV8 337 aa15.35■□□□□ 0.05
SPTLC1-204ENST00000469778 TOMM70O94826 608 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 KIF4BQ2VIQ3 1234 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 ZSCAN25Q6NSZ9 544 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 MXD3Q9BW11 206 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.34■□□□□ 0.051e-6■■□□□ 12.5
SPTLC1-204ENST00000469778 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 BOLA2Q9H3K6 86 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 PAG1Q9NWQ8 432 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
SPTLC1-204ENST00000469778 KIF3CO14782 793 aa15.33■□□□□ 0.04
SPTLC1-204ENST00000469778 CRKP46108 304 aa15.33■□□□□ 0.04
SPTLC1-204ENST00000469778 ZBED3Q96IU2 234 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1-204ENST00000469778 RAI14Q9P0K7 980 aa15.33■□□□□ 0.04
SPTLC1-204ENST00000469778 COL1A1P02452 1464 aaPredicted RBP15.33■□□□□ 0.04
SPTLC1-204ENST00000469778 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 F8W031 263 aaPredicted RBP15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 PRDX5P30044 214 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 PI16Q6UXB8 463 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 TBC1D9Q6ZT07 1266 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 SAMD7Q7Z3H4 446 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 PLEKHM2Q8IWE5 1019 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 PI4K2BQ8TCG2 481 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 PITPNM2Q9BZ72 1349 aa15.32■□□□□ 0.04
SPTLC1-204ENST00000469778 GOLIM4O00461 696 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 WNT10BO00744 389 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 BAG3O95817 575 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 ZFYP08048 801 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 RBM5P52756 815 aaKnown RBP eCLIP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 MECOMQ03112 1051 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 FSTL1Q12841 308 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 TBC1D10BQ4KMP7 808 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 FKBP1CQ5VVH2 108 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 NAA16Q6N069 864 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 SMC1BQ8NDV3 1235 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 EVI5LQ96CN4 794 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 DNAJC2Q99543 621 aaKnown RBP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 NOL10Q9BSC4 688 aaKnown RBP15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 GAKO14976 1311 aa15.31■□□□□ 0.04
SPTLC1-204ENST00000469778 IDH1O75874 414 aaKnown RBP15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 PLCG2P16885 1265 aa15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 HIRAP54198 1017 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 EAPPQ56P03 285 aaPredicted RBP15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 RBM26Q5T8P6 1007 aaKnown RBP15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 CHADLQ6NUI6 762 aa15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 KBTBD3Q8NAB2 608 aa15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 DCPSQ96C86 337 aaKnown RBP15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 PIH1D3Q9NQM4 214 aaKnown RBP15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 CLEC11AQ9Y240 323 aa15.3■□□□□ 0.04
SPTLC1-204ENST00000469778 AKAP11Q9UKA4 1901 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 MYH13Q9UKX3 1938 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 GPR75-ASB3A0A0A6YYF3 556 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 PPP4CP60510 307 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 TNFAIP1Q13829 316 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 UBE3CQ15386 1083 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 GRIK5Q16478 980 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 SLC9C2Q5TAH2 1124 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 CDC37L1Q7L3B6 337 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 APOBEC3FQ8IUX4 373 aaKnown RBP15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 TRPM4Q8TD43 1214 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 PRMT6Q96LA8 375 aaPredicted RBP15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 TMOD2Q9NZR1 351 aa15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 ZNF646O15015 1829 aaPredicted RBP15.29■□□□□ 0.04
SPTLC1-204ENST00000469778 MROH7-TTC4A0A0A0MT08 1334 aa15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 SHTN1A0MZ66 631 aa15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 APOBEC3HQ6NTF7 200 aaKnown RBP15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 SULF1Q8IWU6 871 aa15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 ANTXR1Q9H6X2 564 aa15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 DAGLAQ9Y4D2 1042 aa15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 PPP2R3BQ9Y5P8 575 aa15.28■□□□□ 0.04
SPTLC1-204ENST00000469778 TNNI2P48788 182 aa15.27■□□□□ 0.04
SPTLC1-204ENST00000469778 DIXDC1Q155Q3 683 aa15.27■□□□□ 0.04
SPTLC1-204ENST00000469778 NBPF9Q3BBW0 867 aa15.27■□□□□ 0.04
SPTLC1-204ENST00000469778 SPDYE2Q495Y8 402 aa15.27■□□□□ 0.04
SPTLC1-204ENST00000469778 CNTROBQ8N137 903 aa15.27■□□□□ 0.04
SPTLC1-204ENST00000469778 HIP1O00291 1037 aa15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 EGFRP00533 1210 aa15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 PDE6AP16499 860 aa15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 CYP7A1P22680 504 aa15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 PDE4AP27815 886 aa15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 ANGEL2Q5VTE6 544 aaKnown RBP15.26■□□□□ 0.03
SPTLC1-204ENST00000469778 FAM83AQ86UY5 434 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms