RNA–Protein interactions for RNA: ENST00000467080.1

RBM17-208, Transcript of RNA binding motif protein 17, human

TSL 2

Gene RBM17, Length 837 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM17-208	ENST00000467080	NLRP12	P59046	1061 aa		9.44	□□□□□ -0.9
RBM17-208	ENST00000467080	WFDC12	Q8WWY7	111 aa		9.44	□□□□□ -0.9
RBM17-208	ENST00000467080	SOX17	Q9H6I2	414 aa	Predicted RBP	9.44	□□□□□ -0.9
RBM17-208	ENST00000467080	RNF19A	Q9NV58	838 aa		9.44	□□□□□ -0.9
RBM17-208	ENST00000467080	SPG7	Q9UQ90	795 aa		9.44	□□□□□ -0.9
RBM17-208	ENST00000467080	CHD1	O14646	1710 aa		9.44	□□□□□ -0.9
RBM17-208	ENST00000467080	ARAP1	Q96P48	1450 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	ALX3	O95076	343 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	NOS3	P29474	1203 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	IREB2	P48200	963 aa	Known RBP	9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	GSTM4	Q03013	218 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	DUOXA2	Q1HG44	320 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	TXNRD3	Q86VQ6	643 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	TMEM130	Q8N3G9	435 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	UBASH3B	Q8TF42	649 aa		9.43	□□□□□ -0.9
RBM17-208	ENST00000467080	DUSP9	Q99956	384 aa	Known RBP	9.43	□□□□□ -0.9
RBM17-208	ENST00000467080		F8W735	103 aa	Predicted RBP	9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	GIPC1	O14908	333 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	B3GALT4	O96024	378 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	CYB5RL	Q6IPT4	315 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	ACAD11	Q709F0	780 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	FBXO33	Q7Z6M2	555 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	AGGF1	Q8N302	714 aa	eCLIP	9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	AKTIP	Q9H8T0	292 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	AKAP2	Q9Y2D5	859 aa		9.42	□□□□□ -0.9
RBM17-208	ENST00000467080	XRCC5	P13010	732 aa	Known RBP	9.41	□□□□□ -0.9
RBM17-208	ENST00000467080	FGD1	P98174	961 aa		9.41	□□□□□ -0.9
RBM17-208	ENST00000467080	TAGLN	Q01995	201 aa	Known RBP	9.41	□□□□□ -0.9
RBM17-208	ENST00000467080	FAAP100	Q0VG06	881 aa		9.41	□□□□□ -0.9
RBM17-208	ENST00000467080	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	9.41	□□□□□ -0.9
RBM17-208	ENST00000467080	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	9.41	□□□□□ -0.9
RBM17-208	ENST00000467080	CFTR	P13569	1480 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	GNA15	P30679	374 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	ZNF157	P51786	506 aa	Predicted RBP	9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	MFAP1	P55081	439 aa	Known RBP	9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	KIAA1211	Q6ZU35	1233 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	C3orf58	Q8NDZ4	430 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	FRMD6	Q96NE9	622 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	USP26	Q9BXU7	913 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	SRCIN1	Q9C0H9	1055 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	C12orf49	Q9H741	205 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	ZFYVE1	Q9HBF4	777 aa		9.4	□□□□□ -0.9
RBM17-208	ENST00000467080	PRDM2	Q13029	1718 aa		9.39	□□□□□ -0.91
RBM17-208	ENST00000467080	EIF4G3	O43432	1585 aa	Known RBP	9.39	□□□□□ -0.91
RBM17-208	ENST00000467080	GSTT1	P30711	240 aa		9.39	□□□□□ -0.91
RBM17-208	ENST00000467080	DOC2B	Q14184	412 aa		9.38	□□□□□ -0.91
RBM17-208	ENST00000467080	DDX54	Q8TDD1	881 aa	Known RBP	9.38	□□□□□ -0.91
RBM17-208	ENST00000467080	PARP2	Q9UGN5	583 aa		9.38	□□□□□ -0.91
RBM17-208	ENST00000467080	LOC100289279	A0A1B0GTE1	492 aa		9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	EIF4EBP3	O60516	100 aa	Predicted RBP	9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	MEGF10	Q96KG7	1140 aa		9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	TRIM56	Q9BRZ2	755 aa	Known RBP	9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	NRSN2	Q9GZP1	204 aa		9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	TPSG1	Q9NRR2	321 aa		9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	FAM8A1	Q9UBU6	413 aa		9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	GPN3	Q9UHW5	284 aa	Predicted RBP	9.37	□□□□□ -0.91
RBM17-208	ENST00000467080	DLGAP3	O95886	979 aa		9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	USP17L7	P0C7H9	530 aa		9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	GLB1	P16278	677 aa		9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	EIF4B	P23588	611 aa	Known RBP	9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	RUSC1	Q9BVN2	902 aa		9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	SSBP4	Q9BWG4	385 aa	Predicted RBP	9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	AK5	Q9Y6K8	562 aa		9.36	□□□□□ -0.91
RBM17-208	ENST00000467080	CYP11A1	P05108	521 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	MAOB	P27338	520 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	XPC	Q01831	940 aa	Predicted RBP	9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	POU4F3	Q15319	338 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080		Q6ZS46	218 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	FAM161B	Q96MY7	647 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	BCL2L13	Q9BXK5	485 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	TMEM39A	Q9NV64	488 aa		9.35	□□□□□ -0.91
RBM17-208	ENST00000467080	DAB2	P98082	770 aa		9.34	□□□□□ -0.91
RBM17-208	ENST00000467080	PSMD2	Q13200	908 aa		9.34	□□□□□ -0.91
RBM17-208	ENST00000467080	TPTE2	Q6XPS3	522 aa		9.34	□□□□□ -0.91
RBM17-208	ENST00000467080	DZIP1L	Q8IYY4	767 aa	Known RBP	9.34	□□□□□ -0.91
RBM17-208	ENST00000467080	RNF208	Q9H0X6	261 aa		9.34	□□□□□ -0.91
RBM17-208	ENST00000467080	FBXO24	O75426	580 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	ECEL1	O95672	775 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	CTSB	P07858	339 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	PPP2R3A	Q06190	1150 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	GIPC2	Q8TF65	315 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	TP53INP1	Q96A56	240 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	UBL7	Q96S82	380 aa	Predicted RBP	9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	CORO1B	Q9BR76	489 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	PPM1H	Q9ULR3	514 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	IFT140	Q96RY7	1462 aa		9.33	□□□□□ -0.92
RBM17-208	ENST00000467080	MEGF11	A6BM72	1044 aa		9.32	□□□□□ -0.92
RBM17-208	ENST00000467080	AP3B2	Q13367	1082 aa		9.32	□□□□□ -0.92
RBM17-208	ENST00000467080	TMC4	Q7Z404	712 aa		9.32	□□□□□ -0.92
RBM17-208	ENST00000467080	TMPRSS13	Q9BYE2	586 aa		9.32	□□□□□ -0.92
RBM17-208	ENST00000467080	CEP41	Q9BYV8	373 aa		9.32	□□□□□ -0.92
RBM17-208	ENST00000467080	FURIN	P09958	794 aa		9.31	□□□□□ -0.92
RBM17-208	ENST00000467080	EXOSC6	Q5RKV6	272 aa	Known RBP	9.31	□□□□□ -0.92
RBM17-208	ENST00000467080	NUTM2G	Q5VZR2	741 aa		9.31	□□□□□ -0.92
RBM17-208	ENST00000467080	NECAB3	Q96P71	396 aa	Predicted RBP	9.31	□□□□□ -0.92
RBM17-208	ENST00000467080	CEP44	Q9C0F1	390 aa		9.31	□□□□□ -0.92
RBM17-208	ENST00000467080	TOPBP1	Q92547	1522 aa		9.31	□□□□□ -0.92
RBM17-208	ENST00000467080	ANKRD34A	Q69YU3	496 aa		9.3	□□□□□ -0.92
RBM17-208	ENST00000467080	STK35	Q8TDR2	534 aa		9.3	□□□□□ -0.92
RBM17-208	ENST00000467080	TTF2	Q9UNY4	1162 aa	Known RBP	9.3	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms